RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 ALPPP05187 535 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 ITGAXP20702 1163 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 SKIV2L2P42285 1042 aaKnown RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 PNLIPRP1P54315 467 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 MLLT10P55197 1068 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 VSX2P58304 361 aaPredicted RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 ABATP80404 500 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 PRDX1Q06830 199 aaKnown RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 TSTA3Q13630 321 aaPredicted RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 FASTKQ14296 549 aaKnown RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 CRYMQ14894 314 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 MUM1Q2TAK8 710 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 HSP90AA5PQ58FG0 334 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 SPANXN3Q5MJ09 141 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 DCAF10Q5QP82 559 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 WASHC2DQ5SRD0 308 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 VWA5B1Q5TIE3 1220 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 PRMT9Q6P2P2 845 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 SYDE1Q6ZW31 735 aaPredicted RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 RNF44Q7L0R7 432 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 TMEM151BQ8IW70 566 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 PALM2Q8IXS6 379 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 EFCAB3Q8N7B9 438 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 ASB11Q8WXH4 323 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 TM9SF4Q92544 642 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 GPR21Q99679 349 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 SMAD5Q99717 465 aaKnown RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 EBNA1BP2Q99848 306 aaKnown RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 AARSD1Q9BTE6 412 aaKnown RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 DPH7Q9BTV6 452 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 ACAT2Q9BWD1 397 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 DDX47Q9H0S4 455 aaKnown RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 SLC26A1Q9H2B4 701 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 KCNF1Q9H3M0 494 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 IARS2Q9NSE4 1012 aaKnown RBP9.74□□□□□ -0.85
COMMD1-202ENST00000427417 P4HTMQ9NXG6 502 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 C5AR2Q9P296 337 aa9.74□□□□□ -0.85
COMMD1-202ENST00000427417 A0A0J9YVX5 310 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 KRT87PA6NCN2 255 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 GFYI3L273 518 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 AGPSO00116 658 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 TXNDC9O14530 226 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 PRPF4O43172 522 aaKnown RBP eCLIP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 CTSVO60911 334 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 VPS4BO75351 444 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 HAUS5O94927 633 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 SLC16A8O95907 504 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 EIF2S1P05198 315 aaKnown RBP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 UMODP07911 640 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 MMP11P24347 488 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 MCM3P25205 808 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 VARSP26640 1264 aaKnown RBP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 PAFAH1B1P43034 410 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 CD97P48960 835 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 RGS4P49798 205 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 EMP3P54852 163 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 MPP1Q00013 466 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 DHX9Q08211 1270 aaKnown RBP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 AIMP2Q13155 320 aaKnown RBP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 CUL1Q13616 776 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 MORF4L2Q15014 288 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 NKG7Q16617 165 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 ICE2Q659A1 982 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 FRMPD2BQ6IN97 320 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 ZNF549Q6P9A3 640 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 SUSD1Q6UWL2 747 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 KIAA0408Q6ZU52 694 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 UBE2R2Q712K3 238 aaPredicted RBP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 SPNS2Q8IVW8 549 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 PDIK1LQ8N165 341 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 AGGF1Q8N302 714 aaeCLIP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 GALNT16Q8N428 558 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 C2CD4AQ8NCU7 369 aaPredicted RBP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 GIMAP7Q8NHV1 300 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 CD200R1Q8TD46 325 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 RERGQ96A58 199 aaPredicted RBP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 MIB2Q96AX9 1013 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 MVB12AQ96EY5 273 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 PKP4Q99569 1192 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 SLC30A3Q99726 388 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 PLCD4Q9BRC7 762 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 NUDT9Q9BW91 350 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 ZNF304Q9HCX3 659 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 ATP13A2Q9NQ11 1180 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 TAS2R13Q9NYV9 303 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 ZC3H7BQ9UGR2 993 aaKnown RBP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 TAC3Q9UHF0 121 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 TRMT6Q9UJA5 497 aaKnown RBP9.73□□□□□ -0.85
COMMD1-202ENST00000427417 CDC23Q9UJX2 597 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 VPS4AQ9UN37 437 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 CDC14AQ9UNH5 594 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 MED16Q9Y2X0 877 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 SAR1BQ9Y6B6 198 aa9.73□□□□□ -0.85
COMMD1-202ENST00000427417 HECTD1Q9ULT8 2610 aa9.72□□□□□ -0.85
COMMD1-202ENST00000427417 PABPN1LA6NDY0 278 aaKnown RBP9.72□□□□□ -0.85
COMMD1-202ENST00000427417 E7ENX8 843 aa9.72□□□□□ -0.85
COMMD1-202ENST00000427417 CCDC188H7C350 402 aa9.72□□□□□ -0.85
COMMD1-202ENST00000427417 MASP2O00187 686 aa9.72□□□□□ -0.85
COMMD1-202ENST00000427417 NDC80O14777 642 aa9.72□□□□□ -0.85
COMMD1-202ENST00000427417 CNOT3O75175 753 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms