RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 FUT10Q6P4F1 479 aa13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 CDC26Q8NHZ8 85 aa13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 SLC22A12Q96S37 553 aa13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 KLHL25Q9H0H3 589 aa13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 ZFYVE1Q9HBF4 777 aa13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 SPC25Q9HBM1 224 aa13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 ABCB10Q9NRK6 738 aa13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 BTBD3Q9Y2F9 522 aa13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 SAMHD1Q9Y3Z3 626 aaKnown RBP13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 FAM32AQ9Y421 112 aaKnown RBP13.79□□□□□ -0.2
TPM3P9-201ENST00000424846 RGS10O43665 173 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 TBL1XO60907 577 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 KCNK5O95279 499 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 PGLSO95336 258 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 EOMESO95936 686 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ENGP17813 658 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 TNFRSF1BP20333 461 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 RCVRNP35243 200 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 CSKP41240 450 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 SEPHS1P49903 392 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 SELENBP1Q13228 472 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 IL18R1Q13478 541 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 AGAP7PQ5VUJ5 663 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 CCSAPQ6IQ19 270 aaPredicted RBP13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 UTS2BQ765I0 119 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 VRK3Q8IV63 474 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 APCDD1Q8J025 514 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 PAF1Q8N7H5 531 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 BEND7Q8N7W2 519 aaPredicted RBP13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ATG16L2Q8NAA4 619 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 PROX1Q92786 737 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 HSH2DQ96JZ2 352 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 PSD2Q9BQI7 771 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 REXO4Q9GZR2 422 aaKnown RBP13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 DSN1Q9H410 356 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 MAGEE1Q9HCI5 957 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ITM2CQ9NQX7 267 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ARL15Q9NXU5 204 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 TPRKBQ9Y3C4 175 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 M0R129 80 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 COL6A1P12109 1028 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 SPNP16150 400 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 RPIAP49247 311 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 CRISP3P54108 245 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 RPP38P78345 283 aaKnown RBP13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 RFX4Q33E94 735 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 COLEC12Q5KU26 742 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ADGRF1Q5T601 910 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 GPR153Q6NV75 609 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ANKS3Q6ZW76 656 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ZZZ3Q8IYH5 903 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ENTHD1Q8IYW4 607 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 FAM83FQ8NEG4 500 aaPredicted RBP13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 SOCS4Q8WXH5 440 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 MAL2Q969L2 176 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ITPKCQ96DU7 683 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 SYT17Q9BSW7 474 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ASPSCR1Q9BZE9 553 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 ASIC5Q9NY37 505 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 CRLS1Q9UJA2 301 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 SCN8AQ9UQD0 1980 aa13.78□□□□□ -0.2
TPM3P9-201ENST00000424846 KCNE1BA0A087WTH5 132 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 OR2A25A4D2G3 310 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 CLIC1O00299 241 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 MYO1DO94832 1006 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 WDR47O94967 919 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 FKBP9O95302 570 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 ITPKAP23677 461 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 CCR7P32248 378 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 ST13P50502 369 aaKnown RBP13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 NKX2-5P52952 324 aaPredicted RBP13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 TPTEP56180 551 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 KCNJ8Q15842 424 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 CDKN3Q16667 212 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 LRRC73Q5JTD7 316 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 HECTD3Q5T447 861 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 ADNP2Q6IQ32 1131 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 CERS6Q6ZMG9 384 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 FKBP9P1Q75LS8 142 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 GPR26Q8NDV2 337 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 TPD52L3Q96J77 140 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 KCNC2Q96PR1 638 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 GABARAPL1Q9H0R8 117 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 KRT84Q9NSB2 600 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 ZNF232Q9UNY5 417 aa13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 CAB39Q9Y376 341 aaPredicted RBP13.77□□□□□ -0.2
TPM3P9-201ENST00000424846 M0R082 166 aa13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 SEPT4O43236 478 aa13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 DNAJB5O75953 348 aa13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 CCNDBP1O95273 360 aa13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 CPSF4O95639 269 aaKnown RBP13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 SEMG1P04279 462 aa13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 HMGA1P17096 107 aaKnown RBP13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 RPS3P23396 243 aaKnown RBP eCLIP13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 KDELR2P33947 212 aa13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 NUDT6P53370 316 aa13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 WNT3P56703 355 aa13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 B4GALNT1Q00973 533 aa13.77□□□□□ -0.21
TPM3P9-201ENST00000424846 FOXD4Q12950 439 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms