RNA–Protein interactions for RNA: ENST00000424263.6

PRDM11-201, Transcript of PR/SET domain 11, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PRDM11, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-201ENST00000424263 GRAMD1AQ96CP6 724 aa19.24■□□□□ 0.67
PRDM11-201ENST00000424263 MED8Q96G25 268 aa19.24■□□□□ 0.67
PRDM11-201ENST00000424263 SEC16BQ96JE7 1060 aa19.24■□□□□ 0.67
PRDM11-201ENST00000424263 OR2A14Q96R47 310 aa19.24■□□□□ 0.67
PRDM11-201ENST00000424263 ABCG4Q9H172 646 aa19.24■□□□□ 0.67
PRDM11-201ENST00000424263 SYNDIG1Q9H7V2 258 aa19.24■□□□□ 0.67
PRDM11-201ENST00000424263 TMEM9Q9P0T7 183 aa19.24■□□□□ 0.67
PRDM11-201ENST00000424263 KNTC1P50748 2209 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 STX16-NPEPL1H3BU86 382 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 STX16O14662 325 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 CAPN5O15484 640 aaPredicted RBP19.23■□□□□ 0.67
PRDM11-201ENST00000424263 EDF1O60869 148 aaKnown RBP19.23■□□□□ 0.67
PRDM11-201ENST00000424263 C9P02748 559 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 MYL2P10916 166 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 SDHBP21912 280 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 CCND1P24385 295 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 ATP5F1P24539 256 aaPredicted RBP19.23■□□□□ 0.67
PRDM11-201ENST00000424263 HSPA7P48741 367 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 PPM1FP49593 454 aaPredicted RBP19.23■□□□□ 0.67
PRDM11-201ENST00000424263 CCDC157Q569K6 752 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 ARMC6Q6NXE6 501 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 CACNA2D3Q8IZS8 1091 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 OR2A1Q8NGT9 310 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 RAB3IL1Q8TBN0 382 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 ESAMQ96AP7 390 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 SLC22A18Q96BI1 424 aa19.23■□□□□ 0.67
PRDM11-201ENST00000424263 GFM1Q96RP9 751 aaKnown RBP19.23■□□□□ 0.67
PRDM11-201ENST00000424263 INTS7Q9NVH2 962 aaKnown RBP19.23■□□□□ 0.67
PRDM11-201ENST00000424263 SPTBN2O15020 2390 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 ISM1B1AKI9 464 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 HOXB3P14651 431 aaPredicted RBP19.22■□□□□ 0.67
PRDM11-201ENST00000424263 SIM1P81133 766 aaPredicted RBP19.22■□□□□ 0.67
PRDM11-201ENST00000424263 E2F1Q01094 437 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 STX3Q13277 289 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 TSTA3Q13630 321 aaPredicted RBP19.22■□□□□ 0.67
PRDM11-201ENST00000424263 PRAMEF13Q5VWM6 474 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 CAPN13Q6MZZ7 669 aaPredicted RBP19.22■□□□□ 0.67
PRDM11-201ENST00000424263 IRGCQ6NXR0 463 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 SPESP1Q6UW49 350 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 PLXDC1Q8IUK5 500 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 PHF21BQ96EK2 531 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 OR4K3Q96R72 315 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 DPYSL5Q9BPU6 564 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 CD244Q9BZW8 370 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 ZMYND15Q9H091 742 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 TAC3Q9UHF0 121 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 KLF11O14901 512 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 KCNK5O95279 499 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 PRDX3P30048 256 aaKnown RBP19.22■□□□□ 0.67
PRDM11-201ENST00000424263 GDF5P43026 501 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 INSM1Q01101 510 aaPredicted RBP19.22■□□□□ 0.67
PRDM11-201ENST00000424263 SPIDRQ14159 915 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 TMEM71Q6P5X7 295 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 ZNF574Q6ZN55 896 aaPredicted RBP19.22■□□□□ 0.67
PRDM11-201ENST00000424263 ZCCHC23Q6ZST2 131 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 LRRC70Q7Z2Q7 622 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 PIGWQ7Z7B1 504 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 ZDHHC12Q96GR4 267 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 TGM7Q96PF1 710 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 CD180Q99467 661 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 DLL3Q9NYJ7 618 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 PCDHB11Q9Y5F2 797 aa19.22■□□□□ 0.67
PRDM11-201ENST00000424263 LRRC14BA6NHZ5 514 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 STK16O75716 305 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 WDR47O94967 919 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 SIX3O95343 332 aaPredicted RBP19.21■□□□□ 0.67
PRDM11-201ENST00000424263 CDK4P11802 303 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 LSSP48449 732 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 PDX1P52945 283 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 BST1Q10588 318 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 PCBP2Q15366 365 aaKnown RBP eCLIP19.21■□□□□ 0.675e-6■■■■□ 23.5
PRDM11-201ENST00000424263 SLC5A12Q1EHB4 618 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 LCTLQ6UWM7 567 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 SPATA21Q7Z572 469 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 THOC6Q86W42 341 aaKnown RBP19.21■□□□□ 0.67
PRDM11-201ENST00000424263 CCDC197Q8NCU1 140 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 OR2L3Q8NG85 312 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 OR4D9Q8NGE8 314 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 PPM1MQ96MI6 270 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 ACAT2Q9BWD1 397 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 PCBD2Q9H0N5 130 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 ABCF3Q9NUQ8 709 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 PDP2Q9P2J9 529 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 SH2B3Q9UQQ2 575 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 SLC22A14Q9Y267 594 aa19.21■□□□□ 0.67
PRDM11-201ENST00000424263 TLCD2A6NGC4 264 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 EBAG9O00559 213 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 RPS17P08708 135 aaKnown RBP19.2■□□□□ 0.66
PRDM11-201ENST00000424263 PRKAA2P54646 552 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 YBX1P67809 324 aaKnown RBP19.2■□□□□ 0.66
PRDM11-201ENST00000424263 THEMIS2Q5TEJ8 643 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 ICE2Q659A1 982 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 METTL2BQ6P1Q9 378 aaKnown RBP19.2■□□□□ 0.66
PRDM11-201ENST00000424263 FOXR1Q6PIV2 292 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 FAM92BQ6ZTR7 304 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 TRIM73Q86UV7 250 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 SLC22A9Q8IVM8 553 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 SLITRK4Q8IW52 837 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 ANKS4BQ8N8V4 417 aa19.2■□□□□ 0.66
PRDM11-201ENST00000424263 CCDC126Q96EE4 140 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms