RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 COL8A1P27658 744 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 CMPK1P30085 196 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 TSFMP43897 325 aaKnown RBP15.43■□□□□ 0.06
COL18A1-205ENST00000423214 CCZ1BP86790 482 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 CCZ1P86791 482 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-205ENST00000423214 MUM1Q2TAK8 710 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 CRB2Q5IJ48 1285 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 RNF187Q5TA31 235 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-205ENST00000423214 B3GNTL1Q67FW5 361 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-205ENST00000423214 FRMPD2BQ6IN97 320 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 MRNIPQ6NTE8 343 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 PRMT9Q6P2P2 845 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 C4orf22Q6V702 233 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 RNF44Q7L0R7 432 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 GSTA5Q7RTV2 222 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 PRSS58Q8IYP2 241 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 OR11G2Q8NGC1 345 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 HMGCLL1Q8TB92 370 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 MIEF2Q96C03 454 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 CABS1Q96KC9 395 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 TREX1Q9NSU2 369 aa15.43■□□□□ 0.06
COL18A1-205ENST00000423214 ZNF282Q9UDV7 671 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-205ENST00000423214 ZC3H7BQ9UGR2 993 aaKnown RBP15.43■□□□□ 0.06
COL18A1-205ENST00000423214 WIPF3A6NGB9 483 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 PRPF4O43172 522 aaKnown RBP eCLIP15.42■□□□□ 0.061e-7■■■■□ 24.3
COL18A1-205ENST00000423214 VPS26AO75436 327 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 HPP00738 406 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 NMBRP28336 390 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 RPL22P35268 128 aaKnown RBP15.42■□□□□ 0.06
COL18A1-205ENST00000423214 DCTP40126 519 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 PER3P56645 1201 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 KLC1Q07866 573 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 TSTA3Q13630 321 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-205ENST00000423214 TLR1Q15399 786 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 CCSMST1Q4G0I0 132 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 FAM180AQ6UWF9 173 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 IGFL2Q6UWQ7 119 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 ISLR2Q6UXK2 745 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 LINC00696Q6ZRV3 163 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 SDCCAG8Q86SQ7 713 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-205ENST00000423214 DTWD1Q8N5C7 304 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 STT3BQ8TCJ2 826 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 GRHL3Q8TE85 626 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 BARD1Q99728 777 aaKnown RBP15.42■□□□□ 0.06
COL18A1-205ENST00000423214 ZFYVE21Q9BQ24 234 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 ACAT2Q9BWD1 397 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 ZNF160Q9HCG1 818 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 ENAMQ9NRM1 1142 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 C3orf18Q9UK00 162 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 KLK4Q9Y5K2 254 aa15.42■□□□□ 0.06
COL18A1-205ENST00000423214 VSTM2BA6NLU5 285 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 E5RI56 91 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 H3BMM5 538 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 NRP2O60462 931 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 VAPBO95292 243 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 ZGLP1P0C6A0 271 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 MGAT1P26572 445 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 NPY2RP49146 381 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 CTSL3PQ5NE16 218 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 KCNMB4Q86W47 210 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 OR2A1Q8NGT9 310 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 FAM136AQ96C01 138 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 DPH7Q9BTV6 452 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 FAM114A2Q9NRY5 505 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 SYBUQ9NX95 663 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 CELSR2Q9HCU4 2923 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 SCN3AQ9NY46 2000 aa15.41■□□□□ 0.06
COL18A1-205ENST00000423214 MYO7BQ6PIF6 2116 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 LOC105369274A0A096LPK9 316 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 NSG1A0A0A6YYJ2 146 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 LOC102723532A0A0G2JNH3 316 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 A0A1W2PPV9 198 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 OR2A25A4D2G3 310 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 E2F3O00716 465 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 PHF2O75151 1096 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 NIPSNAP2O75323 286 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 USP1O94782 785 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 MED26O95402 600 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 EDN3P14138 238 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 CXCR2P25025 360 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 ATP5DP30049 168 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 FMO4P31512 558 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 RPA3P35244 121 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-205ENST00000423214 MFAP5Q13361 173 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 CCNG2Q16589 344 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 TYSND1Q2T9J0 566 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 KBTBD2Q8IY47 623 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 OR4N4Q8N0Y3 316 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 FAR1Q8WVX9 515 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 MAIP1Q8WWC4 291 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 LPGAT1Q92604 370 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 C8orf44Q96CB5 159 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 MAGEB10Q96LZ2 347 aaPredicted RBP15.4■□□□□ 0.06
COL18A1-205ENST00000423214 C10orf90Q96M02 699 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 YIPF2Q9BWQ6 316 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 MRPS30Q9NP92 439 aaKnown RBP15.4■□□□□ 0.06
COL18A1-205ENST00000423214 C14orf105Q9NVL8 296 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 CDC14AQ9UNH5 594 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 OSGIN2Q9Y236 505 aa15.4■□□□□ 0.06
COL18A1-205ENST00000423214 DRG1Q9Y295 367 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms