RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PDZD2O15018 2839 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 NF1P21359 2839 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 MTORP42345 2549 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 SYNJ2BP-COX16A0A087WUM0 186 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 IGHV1OR21-1A0A087WYE8 117 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 C21orf140B9A014 251 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 RASA4BC9J798 803 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 RNF103O00237 685 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 RASA4O43374 803 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 GRID2O43424 1007 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 SMAD6O43541 496 aaKnown RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 SNAP91O60641 907 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 UBXN7O94888 489 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 PCCBP05166 539 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 PDHA1P08559 390 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 KRT13P13646 458 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 IL1R2P27930 398 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 HTR1EP28566 365 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 CCR1P32246 355 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 HOXD13P35453 343 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 GARSP41250 739 aaKnown RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 ART1P52961 327 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 CDH4P55283 916 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 YWHAEP62258 255 aaKnown RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 RPS15P62841 145 aaKnown RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 RAD51Q06609 339 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 SLC20A2Q08357 652 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 ELP6Q0PNE2 266 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 CHAF1BQ13112 559 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 DNASE1L3Q13609 305 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 FHL3Q13643 280 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 NR1D2Q14995 579 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 KRT72Q14CN4 511 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 POLD3Q15054 466 aaPredicted RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 LRRC73Q5JTD7 316 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 EFHC1Q5JVL4 640 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 FBXL22Q6P050 247 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 CYB5D1Q6P9G0 228 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 SETD3Q86TU7 594 aaPredicted RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 TAC4Q86UU9 113 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 SFTPA2Q8IWL1 248 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 DCAF4L2Q8NA75 395 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 CHDHQ8NE62 594 aaPredicted RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 POC1BQ8TC44 478 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 UBE2Q2Q8WVN8 375 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 ALG14Q96F25 216 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 TMX3Q96JJ7 454 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 RANBP9Q96S59 729 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 OSBPL9Q96SU4 736 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 TBCBQ99426 244 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 MACROD1Q9BQ69 325 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 WRAP53Q9BUR4 548 aaKnown RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 TNMDQ9H2S6 317 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 ZSCAN16Q9H4T2 348 aaPredicted RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 ACTL8Q9H568 366 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 STN1Q9H668 368 aaKnown RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 SUDS3Q9H7L9 328 aaPredicted RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 APOBEC3GQ9HC16 384 aaKnown RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 APMAPQ9HDC9 416 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 MLXIPLQ9NP71 852 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 GPR83Q9NYM4 423 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 COX16Q9P0S2 106 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 TMEM9Q9P0T7 183 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 LNPEPQ9UIQ6 1025 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 B3GNT3Q9Y2A9 372 aa4.79□□□□□ -1.64
SFXN1-202ENST00000421887 ANKHD1Q8IWZ3 2542 aaKnown RBP4.79□□□□□ -1.64
SFXN1-202ENST00000421887 RTTNQ86VV8 2226 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 FAM90A8PA6NJQ4 464 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 A6NL46 340 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 M0QYV0 167 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 ADAM10O14672 748 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 KLHL41O60662 606 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 KIAA0754O94854 1291 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 POP4O95707 220 aaKnown RBP4.78□□□□□ -1.64
SFXN1-202ENST00000421887 TRUB2O95900 331 aaKnown RBP4.78□□□□□ -1.64
SFXN1-202ENST00000421887 ALPPP05187 535 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 UGT2B4P06133 528 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 FAM90A13PP0C7W8 464 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 FAM90A24PP0C7X0 464 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 VDRP11473 427 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 CCNB1P14635 433 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 ATP5F1P24539 256 aaPredicted RBP4.78□□□□□ -1.64
SFXN1-202ENST00000421887 MT3P25713 68 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 OR1E1P30953 314 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 GCLMP48507 274 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 SERPINH1P50454 418 aaKnown RBP4.78□□□□□ -1.64
SFXN1-202ENST00000421887 VAMP7P51809 220 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 SNRPD1P62314 119 aaKnown RBP4.78□□□□□ -1.64
SFXN1-202ENST00000421887 PDE1BQ01064 536 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 BTKQ06187 659 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 TWIST1Q15672 202 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 KYNUQ16719 465 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 RBM20Q5T481 1227 aaKnown RBP4.78□□□□□ -1.64
SFXN1-202ENST00000421887 CFAP58Q5T655 872 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 RNF220Q5VTB9 566 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 ANKRD40Q6AI12 368 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 SLC30A9Q6PML9 568 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 WDR74Q6RFH5 385 aaPredicted RBP4.78□□□□□ -1.64
SFXN1-202ENST00000421887 LRRC31Q6UY01 552 aa4.78□□□□□ -1.64
SFXN1-202ENST00000421887 SYVN1Q86TM6 617 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms