RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 DCAF12L1Q5VU92 463 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 AMIGO1Q86WK6 493 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 VANGL1Q8TAA9 524 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-206ENST00000421141 NFKBIL1Q9UBC1 381 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-206ENST00000421141 GSTK1Q9Y2Q3 226 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 ELOVL7A1L3X0 281 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 TRIM38O00635 465 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 OR2B3O76000 313 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 ALPPP05187 535 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 PRPS1L1P21108 318 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 GLDCP23378 1020 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 MGAT3Q09327 533 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 FAM174BQ3ZCQ3 159 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 TTMPQ5BVD1 217 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 TRMT10BQ6PF06 316 aaKnown RBP10.46□□□□□ -0.74
PTCH1-206ENST00000421141 ANKRD46Q86W74 232 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 UBALD2Q8IYN6 164 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 CENPIQ92674 756 aaPredicted RBP10.46□□□□□ -0.74
PTCH1-206ENST00000421141 DKKL1Q9UK85 242 aa10.46□□□□□ -0.74
PTCH1-206ENST00000421141 MGAMO43451 1857 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 AGPSO00116 658 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ZNF41P51814 821 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SUSD1Q6UWL2 747 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 GALNT8Q9NY28 637 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 FAM234BA2RU67 622 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 REM1O75628 298 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 IMPDH1P20839 514 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ALKAL1Q6UXT8 129 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 NET1Q7Z628 596 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 OR6C4Q8NGE1 309 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 NAT6Q93015 286 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ARMC5Q96C12 935 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 KIFC1Q9BW19 673 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SERHL2Q9H4I8 314 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ADAP2Q9NPF8 381 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SERHLQ9NQF3 203 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ZMPSTE24O75844 475 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 CBX6O95503 412 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 RPS14P62263 151 aaKnown RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 NRG1Q02297 640 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ZNF542PQ5EBM4 170 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 B3GNT9Q6UX72 402 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 GPR149Q86SP6 731 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 DHRSXQ8N5I4 330 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 C2CD4AQ8NCU7 369 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SHKBP1Q8TBC3 707 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 RORBQ92753 470 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 NPAS2Q99743 824 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 CCDC28BQ9BUN5 200 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SPATA7Q9P0W8 599 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 B4GALT7Q9UBV7 327 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 CAB39Q9Y376 341 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 PSMD11O00231 422 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 PIP5K1BO14986 540 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 YKT6O15498 198 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 CDH1P12830 882 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SRCP12931 536 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 C1orf61Q13536 156 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 RAPSNQ13702 412 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 OR5M3Q8NGP4 307 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ABTB1Q969K4 478 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 RCN3Q96D15 328 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 DUSP26Q9BV47 211 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 HSD3B7Q9H2F3 369 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 NEUROD4Q9HD90 331 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 Q9N2J8 555 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 TEX264Q9Y6I9 313 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 EFCAB10A6NFE3 127 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 FAM72CH0Y354 149 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SLC16A5O15375 505 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SMNDC1O75940 238 aaKnown RBP eCLIP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 MYCLP1P12525 358 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 AFF3P51826 1226 aaKnown RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 IRF9Q00978 393 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 FAM72AQ5TYM5 149 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 FAM72DQ6L9T8 149 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 C11orf88Q6PI97 169 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ZC3HC1Q86WB0 502 aaKnown RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 FAM72BQ86X60 149 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 KCNJ9Q92806 393 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 PGAP3Q96FM1 320 aaPredicted RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 HSPA12BQ96MM6 686 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 CD244Q9BZW8 370 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 GRIP2Q9C0E4 1043 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 PTGES2Q9H7Z7 377 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 P2RX2Q9UBL9 471 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 CKLFQ9UBR5 152 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 PRORSD1PA6NEY8 169 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 RIIAD1A6NNX1 92 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 GPR89AB7ZAQ6 455 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 MFN2O95140 757 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 GPR89BP0CG08 455 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SLC26A3P40879 764 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ALYREFQ86V81 257 aaKnown RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ACTL8Q9H568 366 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 SSU72Q9NP77 194 aaKnown RBP10.45□□□□□ -0.74
PTCH1-206ENST00000421141 NOX1Q9Y5S8 564 aa10.45□□□□□ -0.74
PTCH1-206ENST00000421141 ENTPD5O75356 428 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CD63P08962 238 aa10.44□□□□□ -0.74
PTCH1-206ENST00000421141 CLCN4P51793 760 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms