RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TDRD5Q8NAT2 981 aaKnown RBP3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 OR4K1Q8NGD4 311 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 OR10G8Q8NGN5 311 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 UBE2Q2Q8WVN8 375 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 IWS1Q96ST2 819 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 SYT15Q9BQS2 421 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 CABLES2Q9BTV7 478 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 TRPV4Q9HBA0 871 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 CDH20Q9HBT6 801 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 PANK4Q9NVE7 773 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 CPSF3Q9UKF6 684 aaKnown RBP3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 PPP1R3CQ9UQK1 317 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 A0A0J9YWU9 116 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 C15orf61A6NNL5 157 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 SNURFLB1AK76 121 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 BAG3O95817 575 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 LHCGRP22888 699 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 PCGF2P35227 344 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 MMP12P39900 470 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 TAF6P49848 677 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 VAMP7P51809 220 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 GSDMDP57764 484 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 AIMP1Q12904 312 aaKnown RBP3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 ENPP2Q13822 863 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 E2F5Q15329 346 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 NPTX1Q15818 432 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 KYNUQ16719 465 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 PDLIM3Q53GG5 364 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 TCTE1Q5JU00 501 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 ZNF440Q8IYI8 595 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 LSMEM1Q8N8F7 131 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 PI4KAP1Q8N8J0 262 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 GATAD1Q8WUU5 269 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 C4orf45Q96LM5 186 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 PKP2Q99959 881 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 MCRIP2Q9BUT9 160 aaKnown RBP3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 FGFBP2Q9BYJ0 223 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 TXLNGYQ9BZA5 131 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 OR6C2Q9NZP2 312 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 R4GN57 208 aa3.79□□□□□ -1.8
HMGB1P49-201ENST00000418882 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 TRBV5-5A0A0J9YX44 114 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 AP5Z1O43299 807 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 MAGEC1O60732 1142 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 GSRP00390 522 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 DNTTP04053 509 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 GP1BBP13224 206 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 IRF2P14316 349 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 ACHEP22303 614 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 ALDH1B1P30837 517 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 RBPJQ06330 500 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 MTF1Q14872 753 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 ZNF74Q16587 644 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 SGSM1Q2NKQ1 1148 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 FIP1L1Q6UN15 594 aaKnown RBP3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 CATSPERDQ86XM0 798 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 NIPA2Q8N8Q9 360 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 GPRC5AQ8NFJ5 357 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 OR6J1Q8NGC5 347 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 FAM218AQ96MZ4 157 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 EGFL8Q99944 293 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 FAM129AQ9BZQ8 928 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 PIH1D3Q9NQM4 214 aaKnown RBP3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 STK26Q9P289 416 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 PRSS21Q9Y6M0 314 aa3.78□□□□□ -1.8
HMGB1P49-201ENST00000418882 DCXO43602 365 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 ATP6AP2O75787 350 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 VTNP04004 478 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 SLC2A2P11168 524 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 EPCAMP16422 314 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 ASCL1P50553 236 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 LIMK1P53667 647 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 RASGEF1BQ0VAM2 473 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 PHKG1Q16816 387 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 HLA-BQ31612 363 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 MFSD4BQ5TF39 518 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 LCN1P1Q5VSP4 162 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 LEKR1Q6ZMV7 388 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 DET1Q7L5Y6 550 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 G2E3Q7L622 706 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 SLC37A3Q8NCC5 494 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 ZNF519Q8TB69 540 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 LRRC3BQ96PB8 259 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 DGCR6LQ9BY27 220 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 TRIM15Q9C019 465 aa3.77□□□□□ -1.81
HMGB1P49-201ENST00000418882 CLDN4O14493 209 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 EPHB6O15197 1021 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 PI15O43692 258 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 TBX10O75333 385 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 NXPH2O95156 264 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 MYBL1P10243 752 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 XGP55808 180 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 GUCY2DQ02846 1103 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 KLC1Q07866 573 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 NECTIN1Q15223 517 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 RASA2Q15283 850 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 SNAI3Q3KNW1 292 aa3.76□□□□□ -1.81
HMGB1P49-201ENST00000418882 ARMC4Q5T2S8 1044 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms