RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 C10orf62Q5T681 223 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF367Q7RTV3 350 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 ZSWIM9Q86XI8 627 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 C10orf111Q8N326 155 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 PMEPA1Q969W9 287 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 FUBP1Q96AE4 644 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF382Q96SR6 550 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 ZBTB18Q99592 522 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 FDXACB1Q9BRP7 624 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 BARHL1Q9BZE3 327 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 WDCPQ9H6R7 721 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 SIRT5Q9NXA8 310 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 GPR83Q9NYM4 423 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 DERAQ9Y315 318 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 VIPP01282 170 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 EIF4HQ15056 248 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 QPRTQ15274 297 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 GPR19Q15760 415 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 AP5B1Q2VPB7 878 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 GLYR1Q49A26 553 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 GTDC1Q4AE62 458 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 NDUFAF5Q5TEU4 345 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 CACHD1Q5VU97 1274 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 PLPPR4Q7Z2D5 763 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 DCBLD1Q8N8Z6 715 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 DNAJA4Q8WW22 397 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 FAM120BQ96EK7 910 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 TOE1Q96GM8 510 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 ING3Q9NXR8 418 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 NEU3Q9UQ49 428 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 SAMHD1Q9Y3Z3 626 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 KCNE2Q9Y6J6 123 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 LCHNA4D1U4 455 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ATP6V1G2-DDX39BF2Z307 99 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 E2F3O00716 465 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 PER2O15055 1255 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CSF2P04141 144 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 PRKACAP17612 351 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CXCR3P49682 368 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 HTR6P50406 440 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ERVPABLB-1P60509 514 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 IKZF1Q13422 519 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ZBTB6Q15916 424 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TATDN3Q17R31 274 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TMC8Q8IU68 726 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 STX19Q8N4C7 294 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TRMT61AQ96FX7 289 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 C8orf48Q96LL4 319 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 GPR20Q99678 358 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TSEN34Q9BSV6 310 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 AARSD1Q9BTE6 412 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TMEM245Q9H330 911 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 UCKL1Q9NWZ5 548 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 COQ3Q9NZJ6 369 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TNPO3Q9Y5L0 923 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 NCF1BA6NI72 391 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 NCF1CA8MVU1 366 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CLDN5O00501 218 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 DIRAS1O95057 198 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF682O95780 498 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 PGRP06401 933 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CSF3P09919 207 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 NCF1P14598 390 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 GGT2P36268 569 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 RPS19P39019 145 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CYP4F2P78329 520 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 HOXC5Q00444 222 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 NRG1Q02297 640 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 PTGR1Q14914 329 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 INO80DQ53TQ3 878 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 C9orf57Q5W0N0 161 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TMEM65Q6PI78 240 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 PAQR3Q6TCH7 311 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 IL27RAQ6UWB1 636 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 C2orf69Q8N8R5 385 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 B3GALNT2Q8NCR0 500 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 OR52B6Q8NGF0 335 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TNIP3Q96KP6 325 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 PPP1R16BQ96T49 567 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 HBEGFQ99075 208 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CPPED1Q9BRF8 314 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ULBP1Q9BZM6 244 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF277Q9NRM2 450 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC6A13Q9NSD5 602 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 HOXC10Q9NYD6 342 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TNFRSF10DQ9UBN6 386 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ZNF490Q9ULM2 529 aaPredicted RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CDC7O00311 574 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 GPX5O75715 221 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC22A5O76082 557 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 PDE9AO76083 593 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CCNDBP1O95273 360 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 IL6P05231 212 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 CNPP09543 421 aaKnown RBP7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 TGFB3P10600 412 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 NAT2P11245 290 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 ICAM2P13598 275 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 SOX9P48436 509 aa7.8□□□□□ -1.16
HMGXB4-202ENST00000418170 PXNP49023 591 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms