RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 GKP32189 559 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 STC1P52823 247 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 IRF9Q00978 393 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 OLIG2Q13516 323 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 MYBPC3Q14896 1274 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 RAB6CQ53S08 254 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 CHRDL2Q6WN34 429 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 ZC3H7AQ8IWR0 971 aaKnown RBP12.51□□□□□ -0.41
SCAF8-203ENST00000417268 CLHC1Q8NHS4 586 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 PIH1D2Q8WWB5 315 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 NELL1Q92832 810 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 PPCDCQ96CD2 204 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 C1GALT1C1Q96EU7 318 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 ITCHQ96J02 903 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 RAB6CQ9H0N0 254 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 NLE1Q9NVX2 485 aaPredicted RBP12.51□□□□□ -0.41
SCAF8-203ENST00000417268 MARCH5Q9NX47 278 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 PTBP2Q9UKA9 531 aaKnown RBP12.51□□□□□ -0.41
SCAF8-203ENST00000417268 GTF2A1LQ9UNN4 478 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 KCTD3Q9Y597 815 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 ZNF780BQ9Y6R6 833 aa12.51□□□□□ -0.41
SCAF8-203ENST00000417268 TSPAN4O14817 238 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 SCAMP1O15126 338 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 POP7O75817 140 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 DHFRP00374 187 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 NR2F6P10588 404 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 ITGA2P17301 1181 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 EPORP19235 508 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 ASMTP46597 345 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 TGFBIQ15582 683 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 FBXO43Q4G163 708 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 MARVELD2Q8N4S9 558 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 DCBLD1Q8N8Z6 715 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 AVL9Q8NBF6 648 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 LRRC20Q8TCA0 184 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 SLC22A18Q96BI1 424 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 SLC2A4RGQ9NR83 387 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 EIF2B4Q9UI10 523 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 PIAS3Q9Y6X2 628 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 MAGEB3O15480 346 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 NPHS1O60500 1241 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 FOXD2O60548 495 aaPredicted RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 SUOXP51687 545 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 FBXO48Q5FWF7 155 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 ADGRG6Q86SQ4 1221 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 ARMC8Q8IUR7 673 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 CDK20Q8IZL9 346 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 PRR11Q96HE9 360 aaPredicted RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 YTHDF1Q9BYJ9 559 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 SNX7Q9UNH6 387 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 ST14Q9Y5Y6 855 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 COL4A1P02462 1669 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 TOP3BO95985 862 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 CFIP05156 583 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 HOXB6P17509 224 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 PSMA1P25786 263 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 STAT5AP42229 794 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 MPP7Q5T2T1 576 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 PAQR9Q6ZVX9 377 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 NPWQ8N729 165 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 TMCO6Q96DC7 493 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 KLF16Q9BXK1 252 aaPredicted RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 H3BQ06 376 aaPredicted RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 RSL1D1O76021 490 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 TNFP01375 233 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 CBSLP0DN79 551 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 PPIBP23284 216 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 PRKCHP24723 683 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 NOS3P29474 1203 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 CBSP35520 551 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 DAG1Q14118 895 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 PKDCCQ504Y2 493 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 GPRC6AQ5T6X5 926 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 PARGQ86W56 976 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 RELL1Q8IUW5 271 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 GFM1Q96RP9 751 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 OXSMQ9NWU1 459 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 TMEM9Q9P0T7 183 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 SUCOQ9UBS9 1254 aaKnown RBP12.5□□□□□ -0.41
SCAF8-203ENST00000417268 ZNF232Q9UNY5 417 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 LYVE1Q9Y5Y7 322 aa12.5□□□□□ -0.41
SCAF8-203ENST00000417268 K7EPI3 171 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 CASKO14936 926 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 FFAR2O15552 330 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 TSPAN6O43657 245 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 AP2A2O94973 939 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 CLIC3O95833 236 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 SLC35G6P0C7Q6 338 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 ITIH1P19827 911 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 AQP1P29972 269 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 NTSR1P30989 418 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 SLC7A9P82251 487 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 ZNF423Q2M1K9 1284 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 CILP2Q8IUL8 1156 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 MRGPRX2Q96LB1 330 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 TSSK3Q96PN8 268 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 GPR22Q99680 433 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 SLC46A2Q9BY10 475 aa12.49□□□□□ -0.41
SCAF8-203ENST00000417268 COL11A2P13942 1736 aaPredicted RBP12.49□□□□□ -0.41
SCAF8-203ENST00000417268 LINC01553A4QN01 128 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms