RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 HAUS8Q9BT25 410 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 STOX2Q9P2F5 926 aaPredicted RBP14.13□□□□□ -0.15
CHD1-202ENST00000414220 GPN3Q9UHW5 284 aaPredicted RBP14.13□□□□□ -0.15
CHD1-202ENST00000414220 ADAMTS6Q9UKP5 1117 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 KLHL20Q9Y2M5 609 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 PCDHGA4Q9Y5G9 962 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 KLK4Q9Y5K2 254 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 CACNA1BQ00975 2339 aa14.13□□□□□ -0.15
CHD1-202ENST00000414220 ANKRD11Q6UB99 2663 aaPredicted RBP14.12□□□□□ -0.15
CHD1-202ENST00000414220 A0A1W2PPV9 198 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 EIF4E1BA6NMX2 242 aaKnown RBP14.12□□□□□ -0.15
CHD1-202ENST00000414220 C9J4A7 227 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 TXNDC9O14530 226 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 PIAS1O75925 651 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 RHOXF2BP0C7M4 288 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 PSMB5P28074 263 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 IMPA1P29218 277 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 CRABP2P29373 138 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 GRK3P35626 688 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 DNASE1L3Q13609 305 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 UAP1Q16222 522 aaPredicted RBP14.12□□□□□ -0.15
CHD1-202ENST00000414220 PRAMEF13Q5VWM6 474 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 FCRL6Q6DN72 434 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 RHBDD2Q6NTF9 364 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 TBC1D1Q86TI0 1168 aaPredicted RBP14.12□□□□□ -0.15
CHD1-202ENST00000414220 DSELQ8IZU8 1212 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 CNPY4Q8N129 248 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 TBC1D19Q8N5T2 526 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 ZNF655Q8N720 491 aaPredicted RBP14.12□□□□□ -0.15
CHD1-202ENST00000414220 PPFIBP2Q8ND30 876 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 RERGQ96A58 199 aaPredicted RBP14.12□□□□□ -0.15
CHD1-202ENST00000414220 ZFYVE21Q9BQ24 234 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 RHOXF2Q9BQY4 288 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 PLCD4Q9BRC7 762 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 ARHGAP9Q9BRR9 750 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 NLNQ9BYT8 704 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 DERL2Q9GZP9 239 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 SPRTNQ9H040 489 aaPredicted RBP14.12□□□□□ -0.15
CHD1-202ENST00000414220 CDC42EP4Q9H3Q1 356 aaKnown RBP14.12□□□□□ -0.15
CHD1-202ENST00000414220 NINJ2Q9NZG7 142 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 DMXL2Q8TDJ6 3036 aa14.12□□□□□ -0.15
CHD1-202ENST00000414220 USP24Q9UPU5 2620 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 ASPMQ8IZT6 3477 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 A0A087WUV0 522 aaPredicted RBP14.11□□□□□ -0.15
CHD1-202ENST00000414220 A0A0J9YVX5 310 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 KRT87PA6NCN2 255 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 ERVH48-1M5A8F1 160 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 ACSL3O95573 720 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 GUCA1CO95843 209 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 TSPAN12O95859 305 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 RECKO95980 971 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 ITGB2P05107 769 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 INHBAP08476 426 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 EZRP15311 586 aaKnown RBP14.11□□□□□ -0.15
CHD1-202ENST00000414220 ALAS2P22557 587 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 GABRA4P48169 554 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 HNMTP50135 292 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 TBPL1P62380 186 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 CDKL1Q00532 357 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 RELAQ04206 551 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 GPS2Q13227 327 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 NAE1Q13564 534 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 ZNF460Q14592 562 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 CRTC2Q53ET0 693 aaPredicted RBP14.11□□□□□ -0.15
CHD1-202ENST00000414220 TAF1BQ53T94 588 aaPredicted RBP14.11□□□□□ -0.15
CHD1-202ENST00000414220 LGSNQ5TDP6 509 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 LCTLQ6UWM7 567 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 C17orf64Q86WR6 236 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 CEP97Q8IW35 865 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 TCAIMQ8N3R3 496 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 LSM14AQ8ND56 463 aaKnown RBP14.11□□□□□ -0.15
CHD1-202ENST00000414220 STARD8Q92502 1023 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 FBXL8Q96CD0 374 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 MRRFQ96E11 262 aaKnown RBP14.11□□□□□ -0.15
CHD1-202ENST00000414220 CRELD1Q96HD1 420 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 MCMBPQ9BTE3 642 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 ATG10Q9H0Y0 220 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 ACSS3Q9H6R3 686 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 TMEM184CQ9NVA4 438 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 NDOR1Q9UHB4 597 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 TLK1Q9UKI8 766 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 NFU1Q9UMS0 254 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 FARSAQ9Y285 508 aaKnown RBP14.11□□□□□ -0.15
CHD1-202ENST00000414220 PADI2Q9Y2J8 665 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 DYRK1BQ9Y463 629 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 OARD1Q9Y530 152 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 PCDHGA6Q9Y5G7 932 aa14.11□□□□□ -0.15
CHD1-202ENST00000414220 ADAMTS20P59510 1910 aa14.1□□□□□ -0.15
CHD1-202ENST00000414220 AHCTF1Q8WYP5 2266 aa14.1□□□□□ -0.15
CHD1-202ENST00000414220 OR2A25A4D2G3 310 aa14.1□□□□□ -0.15
CHD1-202ENST00000414220 S100BP04271 92 aaPredicted RBP14.1□□□□□ -0.15
CHD1-202ENST00000414220 EIF2S1P05198 315 aaKnown RBP14.1□□□□□ -0.15
CHD1-202ENST00000414220 RAB40ALP0C0E4 278 aa14.1□□□□□ -0.15
CHD1-202ENST00000414220 CCDC166P0CW27 439 aa14.1□□□□□ -0.15
CHD1-202ENST00000414220 SLC26A3P40879 764 aa14.1□□□□□ -0.15
CHD1-202ENST00000414220 SERPINB9P50453 376 aa14.1□□□□□ -0.15
CHD1-202ENST00000414220 VSX2P58304 361 aaPredicted RBP14.1□□□□□ -0.15
CHD1-202ENST00000414220 DCDP81605 110 aaKnown RBP14.1□□□□□ -0.15
CHD1-202ENST00000414220 SRSF6Q13247 344 aaKnown RBP14.1□□□□□ -0.15
CHD1-202ENST00000414220 PHKG1Q16816 387 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms