RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 ZDHHC3Q9NYG2 299 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 KLHL3Q9UH77 587 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 ZNF229Q9UJW7 825 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 GFRA2O00451 464 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 BMP10O95393 424 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 CLTBP09497 229 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 MTHFRP42898 656 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 RECQLP46063 649 aaPredicted RBP20.24■□□□□ 0.83
SPRN-201ENST00000414069 RPS9P46781 194 aaKnown RBP20.24■□□□□ 0.83
SPRN-201ENST00000414069 CACHD1Q5VU97 1274 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 UBE2UQ5VVX9 321 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 DEPDC4Q8N2C3 294 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 ZFYVE19Q96K21 471 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 PPP3R2Q96LZ3 170 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 C9orf16Q9BUW7 83 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 GPRC5BQ9NZH0 403 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 CXXC1Q9P0U4 656 aaPredicted RBP20.24■□□□□ 0.83
SPRN-201ENST00000414069 AASSQ9UDR5 926 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 SLC25A13Q9UJS0 675 aa20.24■□□□□ 0.83
SPRN-201ENST00000414069 PRKD3O94806 890 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 CLDN9O95484 217 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 PPP3CCP48454 512 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 RAB15P59190 212 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 PIGFQ07326 219 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 PDLIM5Q96HC4 596 aaKnown RBP20.23■□□□□ 0.83
SPRN-201ENST00000414069 ALPK1Q96QP1 1244 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 RIOK2Q9BVS4 552 aaKnown RBP20.23■□□□□ 0.83
SPRN-201ENST00000414069 RABL2AQ9UBK7 228 aaPredicted RBP20.23■□□□□ 0.83
SPRN-201ENST00000414069 GBAP04062 536 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 CHRNB1P11230 501 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 CCNA2P20248 432 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 CLK3P49761 638 aaKnown RBP20.23■□□□□ 0.83
SPRN-201ENST00000414069 TMC5Q6UXY8 1006 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 MSRB3Q8IXL7 192 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 DHRSXQ8N5I4 330 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 HTRA1Q92743 480 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 KCTD5Q9NXV2 234 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 PCDHB14Q9Y5E9 798 aa20.23■□□□□ 0.83
SPRN-201ENST00000414069 MATN1P21941 496 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 HPCAL1P37235 193 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 CYP4F3Q08477 520 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 SLC14A1Q13336 389 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 CARD16Q5EG05 197 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 OR4F3Q6IEY1 312 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 SPESP1Q6UW49 350 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 ADNPQ9H2P0 1102 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 TBC1D14Q9P2M4 693 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 TNFRSF10AO00220 468 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 CAPNS1P04632 268 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 PSMA3P25788 255 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 SPINT3P49223 89 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 PWP1Q13610 501 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 INAVAQ3KP66 663 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 MACC1Q6ZN28 852 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 GPR156Q8NFN8 814 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 MUS81Q96NY9 551 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 ANKRD60Q9BZ19 345 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 WARS2Q9UGM6 360 aaKnown RBP20.22■□□□□ 0.83
SPRN-201ENST00000414069 NEUROG3Q9Y4Z2 214 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 PCDHGA8Q9Y5G5 932 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 GON4LQ3T8J9 2241 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 SOCS5O75159 536 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 CPSF4O95639 269 aaKnown RBP20.22■□□□□ 0.83
SPRN-201ENST00000414069 GPIP06744 558 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 OR56A5P0C7T3 313 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 XPAP23025 273 aaPredicted RBP20.22■□□□□ 0.83
SPRN-201ENST00000414069 EEFSECP57772 596 aaKnown RBP20.22■□□□□ 0.83
SPRN-201ENST00000414069 TUBA4AP68366 448 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 IFITM2Q01629 132 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 CHRNB3Q05901 458 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 CHIT1Q13231 466 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 GRIN2CQ14957 1233 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 ATP6AP1Q15904 470 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 OR2A12Q8NGT7 310 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 PKD2L2Q9NZM6 624 aa20.22■□□□□ 0.83
SPRN-201ENST00000414069 TRBV5-4A0A0C4DH59 114 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 ANXA6P08133 673 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 HLA-EP13747 358 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 POLR2IP36954 125 aaKnown RBP20.21■□□□□ 0.83
SPRN-201ENST00000414069 CTSCP53634 463 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 AASDHQ4L235 1098 aaPredicted RBP20.21■□□□□ 0.83
SPRN-201ENST00000414069 FAAH2Q6GMR7 532 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 OR7A2PQ8NGA2 310 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 TRUB1Q8WWH5 349 aaKnown RBP20.21■□□□□ 0.83
SPRN-201ENST00000414069 C1orf109Q9NX04 203 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 SMPD3Q9NY59 655 aaPredicted RBP20.21■□□□□ 0.83
SPRN-201ENST00000414069 CNOT11Q9UKZ1 510 aaKnown RBP20.21■□□□□ 0.83
SPRN-201ENST00000414069 KPNA3O00505 521 aaPredicted RBP20.21■□□□□ 0.83
SPRN-201ENST00000414069 ZNF682O95780 498 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 RPS3P23396 243 aaKnown RBP eCLIP20.21■□□□□ 0.83
SPRN-201ENST00000414069 BDKRB1P46663 353 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 ARHGEF6Q15052 776 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 TCEAL5Q5H9L2 206 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 FAM180BQ6P0A1 224 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 PARP8Q8N3A8 854 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 ZBP1Q9H171 429 aa20.21■□□□□ 0.83
SPRN-201ENST00000414069 CST1P01037 141 aa20.2■□□□□ 0.82
SPRN-201ENST00000414069 GNRH1P01148 92 aa20.2■□□□□ 0.82
SPRN-201ENST00000414069 IL7RP16871 459 aa20.2■□□□□ 0.82
SPRN-201ENST00000414069 TPD52P55327 224 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms