RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SLC2A11Q9BYW1 496 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 TM6SF1Q9BZW5 370 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 SLA2Q9H6Q3 261 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 RAB9BQ9NP90 201 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 CNOT2Q9NZN8 540 aaKnown RBP4.67□□□□□ -1.66
LSM5-205ENST00000409952 ATP6V1HQ9UI12 483 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 FBXL2Q9UKC9 423 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 CDC14AQ9UNH5 594 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 MGAT4BQ9UQ53 548 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 ZNF510Q9Y2H8 683 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 NAALAD2Q9Y3Q0 740 aa4.67□□□□□ -1.66
LSM5-205ENST00000409952 TRAV24A0A0B4J272 114 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 XKRY2A2RUG3 117 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 OR2M5A3KFT3 312 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 BOLA2-SMG1P6H3BVE0 249 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 TLX2O43763 284 aaPredicted RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 LANCL1O43813 399 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 ATP6AP2O75787 350 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 MMP13P45452 471 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 RPL21P46778 160 aaKnown RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 CLDN15P56746 228 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 CD81P60033 236 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 MAT1AQ00266 395 aaKnown RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 PNRC1Q12796 327 aaPredicted RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 ILF2Q12905 390 aaKnown RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 DDX39BQ13838 428 aaKnown RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 VEZF1Q14119 521 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 MXD4Q14582 209 aaPredicted RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 SLC36A3Q495N2 470 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 SYT14P1Q58G82 188 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 TMEM41BQ5BJD5 291 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 EPHA10Q5JZY3 1008 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 SUSD4Q5VX71 490 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 TPGS2Q68CL5 300 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 ARHGAP17Q68EM7 881 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 PM20D1Q6GTS8 502 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 FAM166AQ6J272 317 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 DGLUCYQ7Z3D6 616 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 EIF1ADQ8N9N8 165 aaKnown RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 OSR1Q8TAX0 266 aaPredicted RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 OIT3Q8WWZ8 545 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 EME1Q96AY2 570 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 PDLIM2Q96JY6 352 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 TTC25Q96NG3 672 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 GFM1Q96RP9 751 aaKnown RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 EFHD1Q9BUP0 239 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 EDEM2Q9BV94 578 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 FICDQ9BVA6 458 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 CDK19Q9BWU1 502 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 EGLN1Q9GZT9 426 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 SIRPDQ9H106 197 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 TMEM231Q9H6L2 316 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 ROPN1Q9HAT0 212 aaPredicted RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 MRPL17Q9NRX2 175 aaKnown RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 TMEM51Q9NW97 253 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 DONSONQ9NYP3 566 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 NPAP1Q9NZP6 1156 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 NDUFA13Q9P0J0 144 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 PTGFRNQ9P2B2 879 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 ARPP21Q9UBL0 812 aaPredicted RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 NOCTQ9UK39 431 aaKnown RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 AGO2Q9UKV8 859 aaKnown RBP4.66□□□□□ -1.66
LSM5-205ENST00000409952 ENTPD4Q9Y227 616 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 SH3GLB1Q9Y371 365 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 MAB21L2Q9Y586 359 aa4.66□□□□□ -1.66
LSM5-205ENST00000409952 C15orf38-AP3S2A0A0A6YYH1 394 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 LRRC3CA6NJW4 275 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 DVL1O14640 695 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 PPEF2O14830 753 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 RPS6KA5O75582 802 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 DDNO94850 711 aaPredicted RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 VNN2O95498 520 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 GAS8O95995 478 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 HAPLN1P10915 354 aaPredicted RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 ITGA3P26006 1051 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 MARCKSP29966 332 aaPredicted RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 PRDX6P30041 224 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 ARHGAP25P42331 645 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 NSFP46459 744 aaKnown RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 MXI1P50539 228 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 HNRNPH2P55795 449 aaKnown RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 CLDN20P56880 219 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 SSTP61278 116 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 UBE2HP62256 183 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 GABPB1Q06547 395 aaPredicted RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 DSC1Q08554 894 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 KIF5AQ12840 1032 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 IFT88Q13099 833 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 PRKAA1Q13131 559 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 GK2Q14410 553 aaPredicted RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 CCDC152Q4G0S7 254 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 MCMDC2Q4G0Z9 681 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 XKR9Q5GH70 373 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 C9orf50Q5SZB4 431 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 STXBP5Q5T5C0 1151 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 ARHGEF16Q5VV41 709 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 FIP1L1Q6UN15 594 aaKnown RBP4.65□□□□□ -1.67
LSM5-205ENST00000409952 SIGLEC15Q6ZMC9 328 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 SLC16A9Q7RTY1 509 aa4.65□□□□□ -1.67
LSM5-205ENST00000409952 ARHGAP22Q7Z5H3 698 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms