RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 CST1P01037 141 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 SRPRAP08240 638 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 HNRNPA1P09651 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 PRLHRP49683 370 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 IST1P53990 364 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 NAE1Q13564 534 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 DOC2AQ14183 400 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 PLCL1Q15111 1095 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 PARS2Q7L3T8 475 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 ZDHHC13Q8IUH4 622 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 CLEC4FQ8N1N0 589 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 GLMNQ92990 594 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 CCDC138Q96M89 665 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 CCM2Q9BSQ5 444 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 RSL24D1Q9UHA3 163 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 G3V2T6 193 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 RFXANKO14593 260 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 WNT9AO14904 365 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 PER2O15055 1255 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 CYP17A1P05093 508 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 MYCLP1P12525 358 aaPredicted RBP16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 PRPS1L1P21108 318 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 PCSK6P29122 969 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 KIR3DL1P43629 444 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 VASPP50552 380 aaPredicted RBP16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 ZNF33BQ06732 778 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 CSTF3Q12996 717 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 MTAPQ13126 283 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 TCEAL5Q5H9L2 206 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 ERAP2Q6P179 960 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 TMEM220Q6QAJ8 160 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 C12orf40Q86WS4 652 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 ALDH16A1Q8IZ83 802 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 ATL1Q8WXF7 558 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 MED8Q96G25 268 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 OR4K3Q96R72 315 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 MTERF1Q99551 399 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 VPS29Q9UBQ0 182 aa16.44■□□□□ 0.22
DNMT3A-205ENST00000402667 TLL1O43897 1013 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 SERPINA1P01009 418 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 CATP04040 527 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 CALRP27797 417 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 BDKRB1P46663 353 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 ABHD18Q0P651 414 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 LAPTM5Q13571 262 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 CAMK1Q14012 370 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 MSANTD1Q6ZTZ1 278 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 ZNF551Q7Z340 670 aaPredicted RBP16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 SPRED2Q7Z698 418 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 SYT12Q8IV01 421 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 MUS81Q96NY9 551 aa16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 WRAP53Q9BUR4 548 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 SPATA6Q9NWH7 488 aaPredicted RBP16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 THG1LQ9NWX6 298 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 NUP214P35658 2090 aaPredicted RBP16.43■□□□□ 0.22
DNMT3A-205ENST00000402667 KPNA3O00505 521 aaPredicted RBP16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 NPC1O15118 1278 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 SLC16A8O95907 504 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 ASLP04424 464 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 THRBP10828 461 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 ADH5P11766 374 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 PDHA2P29803 388 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 CDK9P50750 372 aaKnown RBP16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 DDX39BQ13838 428 aaKnown RBP16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 UGT8Q16880 541 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 DOK6Q6PKX4 331 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 OR7A2PQ8NGA2 310 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 REXO5Q96IC2 774 aaKnown RBP16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 PKP4Q99569 1192 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 REXO4Q9GZR2 422 aaKnown RBP16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 GNGT2O14610 69 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 HPRP00739 348 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 IMPA1P29218 277 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 HNRNPFP52597 415 aaKnown RBP16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 METAP1P53582 386 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 ST8SIA6P61647 398 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 SLC14A1Q13336 389 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 PPIGQ13427 754 aaKnown RBP eCLIP16.42■□□□□ 0.223e-8■■□□□ 13.2
DNMT3A-205ENST00000402667 GRHL2Q6ISB3 625 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 FKBP9P1Q75LS8 142 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 LPCAT2Q7L5N7 544 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 NRSN1Q8IZ57 195 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 NELL1Q92832 810 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 MAGIXQ9H6Y5 334 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 SMURF2Q9HAU4 748 aa16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 DDX18Q9NVP1 670 aaKnown RBP16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 MRPS23Q9Y3D9 190 aaKnown RBP16.42■□□□□ 0.22
DNMT3A-205ENST00000402667 H0YIV9 168 aa16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 ZNF197O14709 1029 aa16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 SCN2BO60939 215 aa16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 C1QCP02747 245 aa16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 PBLDP30039 288 aaPredicted RBP16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 TRPC1P48995 793 aa16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 WNT3P56703 355 aa16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 SRSF11Q05519 484 aaKnown RBP16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 MESP2Q0VG99 397 aa16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 SF1Q15637 639 aaKnown RBP16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 DUOXA1Q1HG43 343 aa16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 DPY19L1Q2PZI1 675 aa16.41■□□□□ 0.22
DNMT3A-205ENST00000402667 C11orf91Q3C1V1 193 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms