RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 NUMBLQ9Y6R0 609 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 CIB4A0PJX0 185 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 SH3PXD2BA1X283 911 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 FADS2P1A8MWK0 482 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 M0QZQ0 153 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 UGT1A9O60656 530 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 SERPINA1P01009 418 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PROS1P07225 676 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 UGT1A6P19224 532 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 RYKP34925 604 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 RAB14P61106 215 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PSME3P61289 254 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP47-203ENST00000399455 NYAP1Q6ZVC0 841 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 PIH1D2Q8WWB5 315 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 NKD2Q969F2 451 aaPredicted RBP7.75□□□□□ -1.17
USP47-203ENST00000399455 PGM2Q96G03 612 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TRIM8Q9BZR9 551 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 UGT1A7Q9HAW7 530 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 UGT1A10Q9HAW8 530 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 UGT1A8Q9HAW9 530 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 SLAMF7Q9NQ25 335 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TOR4AQ9NXH8 423 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 TAS2R9Q9NYW1 312 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 COPG2Q9UBF2 871 aa7.75□□□□□ -1.17
USP47-203ENST00000399455 A0A1W2PRB8 838 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 A0A1W2PRG6 482 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 FTCDNL1E5RQL4 147 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 TMEM189-UBE2V1I3L0A0 370 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 NPHS1O60500 1241 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 UGT2B11O75310 529 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 SMNDC1O75940 238 aaKnown RBP eCLIP7.74□□□□□ -1.17
USP47-203ENST00000399455 STC2O76061 302 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 OR5F1O95221 314 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 DLGAP3O95886 979 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 NUDT17P0C025 328 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 C6P13671 934 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 SLC1A2P43004 574 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 GDI2P50395 445 aaKnown RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 C1orf61Q13536 156 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 MEIOBQ8N635 442 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 SLC5A8Q8N695 610 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 PNLDC1Q8NA58 520 aaKnown RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 DDX1Q92499 740 aaKnown RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 CCDC28BQ9BUN5 200 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 ANKZF1Q9H8Y5 726 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 VPS29Q9UBQ0 182 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 PNMA8CA0A1B0GUJ8 204 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 SAP18O00422 153 aaKnown RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 SCGB2A1O75556 95 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 CHRNGP07510 517 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 ABOP16442 354 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 MTTPP55157 894 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 SLC10A7Q0GE19 358 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 SMCO1Q147U7 214 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 TLR1Q15399 786 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 NCBP2-AS2Q69YL0 99 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 Q6ZSR6 202 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 CCDC103Q8IW40 242 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 MFSD6LQ8IWD5 586 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 METTL27Q8N6F8 245 aaPredicted RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 FATE1Q969F0 183 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 USB1Q9BQ65 265 aaKnown RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 TRIM2Q9C040 744 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 PLCL2Q9UPR0 1127 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 COQ4Q9Y3A0 265 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 CLOCKO15516 846 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 CDKN1CP49918 316 aaPredicted RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 PAFAH1B3Q15102 231 aaKnown RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 TMEM151BQ8IW70 566 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 CSNK1A1LQ8N752 337 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 ZNF347Q96SE7 839 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 GRIP2Q9C0E4 1043 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 DTLQ9NZJ0 730 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 SRPK3Q9UPE1 567 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 WASF3Q9UPY6 502 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 GLI3P10071 1580 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 A0A1B0GTW7 788 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 POLR1CO15160 346 aaPredicted RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 ARSAP15289 507 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 CD38P28907 300 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 SLC6A9P48067 706 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 VBP1P61758 197 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 JAG1P78504 1218 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 DLG1Q12959 904 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 IL23RQ5VWK5 629 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 FRRS1Q6ZNA5 592 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 ABHD12BQ7Z5M8 362 aaPredicted RBP7.74□□□□□ -1.17
USP47-203ENST00000399455 EID2Q8N6I1 236 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 OR2T12Q8NG77 320 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 ZNF516Q92618 1163 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 HSPA12BQ96MM6 686 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 DUSP26Q9BV47 211 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 FUT8Q9BYC5 575 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 C8orf4Q9NR00 106 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 POFUT2Q9Y2G5 429 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 A0A1W2PQ72 361 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 H3BNC9 293 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 AHSA1O95433 338 aa7.74□□□□□ -1.17
USP47-203ENST00000399455 BMP4P12644 408 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms