RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 EXOC3L1Q86VI1 746 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CARFQ8N187 725 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 GALNT15Q8N3T1 639 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 UBTD2Q8WUN7 234 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ATL1Q8WXF7 558 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PMEPA1Q969W9 287 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SLC22A18Q96BI1 424 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MED8Q96G25 268 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 APOPT1Q96IL0 206 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SCYL1Q96KG9 808 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 MRPL57Q9BQC6 102 aaKnown RBP11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SCNM1Q9BWG6 230 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TMBIM4Q9HC24 238 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FAM60AQ9NP50 221 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CCDC177Q9NQR7 707 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CUEDC1Q9NWM3 386 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 OCIAD1Q9NX40 245 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CD274Q9NZQ7 290 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 BTRCQ9Y297 605 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PCDHB11Q9Y5F2 797 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 KLK4Q9Y5K2 254 aa11.95□□□□□ -0.5
HLA-DQB1-203ENST00000399082 NCOR2Q9Y618 2525 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZNF839A8K0R7 811 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 G3V2L1 256 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TYROBPO43914 113 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PLIN3O60664 434 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 GLRA3O75311 464 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SPAG7O75391 227 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RASSF9O75901 435 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SIX3O95343 332 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CTSBP07858 339 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FOLR1P15328 257 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ITIH1P19827 911 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CRHR1P34998 444 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RPA3P35244 121 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 HNMTP50135 292 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PRDX1Q06830 199 aaKnown RBP11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TSTA3Q13630 321 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SF1Q15637 639 aaKnown RBP11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 LCTLQ6UWM7 567 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PAQR7Q86WK9 346 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 D2HGDHQ8N465 521 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 C19orf47Q8N9M1 422 aaKnown RBP11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ARL8AQ96BM9 186 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ABCF3Q9NUQ8 709 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 WWOXQ9NZC7 414 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SLC17A7Q9P2U7 560 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 DCDC2Q9UHG0 476 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SLC22A14Q9Y267 594 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 LOXL2Q9Y4K0 774 aa11.94□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CCDC187A0A096LP49 1063 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 OR2A25A4D2G3 310 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SYCE1LA8MT33 242 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 A8MT66 165 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 COPEO14579 308 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 DLX3O60479 287 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CTSVO60911 334 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 WDR47O94967 919 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ZBTB11O95625 1053 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 EBLN1P0CF75 366 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FGF3P11487 239 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PFKFB4Q16877 469 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 C3orf38Q5JPI3 329 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CAPN13Q6MZZ7 669 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FIGLAQ6QHK4 219 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RAB11FIP2Q7L804 512 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 HDXQ7Z353 690 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 THOC6Q86W42 341 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 KMT5CQ86Y97 462 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TCAIMQ8N3R3 496 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FBXO39Q8N4B4 442 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 DNAJC22Q8N4W6 341 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PTGR2Q8N8N7 351 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 AGBL5Q8NDL9 886 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 NEIL2Q969S2 332 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 ALKBH8Q96BT7 664 aaKnown RBP11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 GRAMD1AQ96CP6 724 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TLCD1Q96CP7 247 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 DPH7Q9BTV6 452 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CD244Q9BZW8 370 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CHRNA10Q9GZZ6 450 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SPNS1Q9H2V7 528 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CENPHQ9H3R5 247 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 VIPAS39Q9H9C1 493 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 APMAPQ9HDC9 416 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 SATB2Q9UPW6 733 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 NEUROG3Q9Y4Z2 214 aa11.93□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PABPN1LA6NDY0 278 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 EFCAB7A8K855 629 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 H3BMH7 237 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 TMX2-CTNND1H3BSU7 103 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 PLD2O14939 933 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 STK16O75716 305 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 IPO13O94829 963 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 FKBP9O95302 570 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 S100BP04271 92 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 RPS17P08708 135 aaKnown RBP11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CDH1P12830 882 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 GFAPP14136 432 aa11.92□□□□□ -0.5
HLA-DQB1-203ENST00000399082 CCND1P24385 295 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms