RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TCF3P15923 654 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 EFNA1P20827 205 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ARSDP51689 593 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 KRT33BQ14525 404 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SEMA3AQ14563 771 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 KIAA0040Q15053 153 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PTPRNQ16849 979 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TOR1AIP1Q5JTV8 583 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF613Q6PF04 617 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CD300LGQ6UXG3 332 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TRPV1Q8NER1 839 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 OR5K1Q8NHB7 308 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 DNAJB3Q8WWF6 145 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 C1GALT1C1Q96EU7 318 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ZFP42Q96MM3 310 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TUBB1Q9H4B7 451 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ELAC1Q9H777 363 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 GTF2A1LQ9UNN4 478 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SAMD4AQ9UPU9 718 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CLCA2Q9UQC9 943 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MN1Q10571 1320 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CACNB4O00305 520 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 UPK1AO00322 258 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PLK4O00444 970 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ORC5O43913 435 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 RFPL2O75678 378 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SNAP29O95721 258 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 IFNA16P05015 189 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CHRNB1P11230 501 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 YWHAQP27348 245 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 RCVRNP35243 200 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 HPCAL1P37235 193 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CDH4P55283 916 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 DCDC1P59894 354 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PPP1R8Q12972 351 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 EFR3AQ14156 821 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF404Q494X3 552 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ANKDD1AQ495B1 522 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TRIM48Q8IWZ4 208 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PHF10Q8WUB8 498 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 NPLQ9BXD5 320 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CHIAQ9BZP6 476 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 RACGAP1Q9H0H5 632 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MAFFQ9ULX9 164 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ABCG2Q9UNQ0 655 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 FER1L6Q2WGJ9 1857 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PDHXO00330 501 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ALDH2P05091 517 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SREBF2Q12772 1141 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MPP7Q5T2T1 576 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PRAMEF18Q5VWM3 479 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ZDHHC20Q5W0Z9 365 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ANKS3Q6ZW76 656 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 OR52J3Q8NH60 311 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 C9orf43Q8TAL5 461 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MUS81Q96NY9 551 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 RPRD1AQ96P16 312 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 KCNH6Q9H252 994 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CLDN24A6NM45 220 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 QSOX1O00391 747 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 NUAK1O60285 661 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ULK1O75385 1050 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 GPX2P18283 190 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 STAT5AP42229 794 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 KCNA10Q16322 511 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 AP5B1Q2VPB7 878 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 MORN1Q5T089 497 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 AMIGO1Q86WK6 493 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 GPSM1Q86YR5 675 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PLPP6Q8IY26 295 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 Q8N9G6 341 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 TOR1AIP2Q8NFQ8 470 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 NUP50Q9UKX7 468 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PPT2Q9UMR5 302 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PLXNA1Q9UIW2 1896 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 NPEPPSL1A6NEC2 478 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 FZD6O60353 706 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ITGALP20701 1170 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CHRNA4P43681 627 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 DIO3P55073 304 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ISL1P61371 349 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 MTAPQ13126 283 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 KEAP1Q14145 624 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 MRPL58Q14197 206 aaKnown RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CCDC157Q569K6 752 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 DET1Q7L5Y6 550 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 GPRIN1Q7Z2K8 1008 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 TSPYL5Q86VY4 417 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-205ENST00000397611 ABI1Q8IZP0 508 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CD200R1Q8TD46 325 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 OR52E6Q96RD3 313 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 RAD9AQ99638 391 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 SLC30A3Q99726 388 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 CLPBQ9H078 707 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 MMP27Q9H306 513 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 C1orf109Q9NX04 203 aa5.31□□□□□ -1.56
PTPRD-205ENST00000397611 PLD2O14939 933 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms