RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CDK9P50750 372 aaKnown RBP16.06■□□□□ 0.16
TRIM39-205ENST00000396551 MTAPQ13126 283 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 KCNC3Q14003 757 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 DOC2AQ14183 400 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 SF1Q15637 639 aaKnown RBP16.06■□□□□ 0.16
TRIM39-205ENST00000396551 UGT8Q16880 541 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 XKR6Q5GH73 641 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 AGTRAPQ6RW13 159 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 GPR180Q86V85 440 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 OR7A2PQ8NGA2 310 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 NCLNQ969V3 563 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 OTUB2Q96DC9 234 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 MUS81Q96NY9 551 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 SMURF2Q9HAU4 748 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 TCF20Q9UGU0 1960 aaKnown RBP16.06■□□□□ 0.16
TRIM39-205ENST00000396551 KIAA1549LQ6ZVL6 1849 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 NPC1O15118 1278 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 SERPINA1P01009 418 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 CYP17A1P05093 508 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 THRBP10828 461 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 XPAP23025 273 aaPredicted RBP16.06■□□□□ 0.16
TRIM39-205ENST00000396551 PRLHRP49683 370 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 NAE1Q13564 534 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 SYTL3Q4VX76 610 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 LDLRAP1Q5SW96 308 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 ADNP2Q6IQ32 1131 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 ALDH16A1Q8IZ83 802 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 FAM9CQ8IZT9 166 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 GLMNQ92990 594 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 THEGQ9P2T0 379 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 ERVK-11Q9UQG0 969 aa16.06■□□□□ 0.16
TRIM39-205ENST00000396551 WNT9AO14904 365 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 SPINT1O43278 529 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 PDHA2P29803 388 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 YAP1P46937 504 aaKnown RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 SH3BGRP55822 239 aaPredicted RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 WNT3P56703 355 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 TMEM115Q12893 351 aaPredicted RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 PPP1R8Q12972 351 aaKnown RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 CSTF3Q12996 717 aaKnown RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 CAMK1Q14012 370 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 ACOX1Q15067 660 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 LPCAT2Q7L5N7 544 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 TMEM179BQ7Z7N9 219 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 CLEC4FQ8N1N0 589 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 AP2M1Q96CW1 435 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 MTERF1Q99551 399 aaKnown RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 NPLQ9BXD5 320 aaPredicted RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 REXO4Q9GZR2 422 aaKnown RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 RAD18Q9NS91 495 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 THG1LQ9NWX6 298 aaKnown RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 G3V2T6 193 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 RFXANKO14593 260 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 PER2O15055 1255 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 UGDHO60701 494 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 SCN2BO60939 215 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 ELFN1P0C7U0 828 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 MAP4P27816 1152 aaKnown RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 CTBSQ01459 385 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 MFSD4BQ5TF39 518 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 DOK6Q6PKX4 331 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 OR10Q1Q8NGQ4 319 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 CSGALNACT1Q8TDX6 532 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 TMEM159Q96B96 161 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 RSPRY1Q96DX4 576 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 LIN28AQ9H9Z2 209 aaKnown RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 LTB4R2Q9NPC1 389 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 SPATA6Q9NWH7 488 aaPredicted RBP16.05■□□□□ 0.16
TRIM39-205ENST00000396551 GULP1Q9UBP9 304 aa16.05■□□□□ 0.16
TRIM39-205ENST00000396551 A0A1B0GVG6 124 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 ATG13O75143 517 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 IMPA1P29218 277 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 HOXA9P31269 272 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 DGKGP49619 791 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 ABHD18Q0P651 414 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 DDX39BQ13838 428 aaKnown RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 ZDHHC13Q8IUH4 622 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 SYT12Q8IV01 421 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 VN1R2Q8NFZ6 395 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 MED8Q96G25 268 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 REXO5Q96IC2 774 aaKnown RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 MAGEB10Q96LZ2 347 aaPredicted RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 PKP4Q99569 1192 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 CCM2Q9BSQ5 444 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 WRAP53Q9BUR4 548 aaKnown RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 COQ6Q9Y2Z9 468 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 SOBPA7XYQ1 873 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 QSOX1O00391 747 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 ETHE1O95571 254 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 HPRP00739 348 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 ASLP04424 464 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 ELK4P28324 431 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 PBLDP30039 288 aaPredicted RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 KIR3DL1P43629 444 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 ZNF658BQ4V348 819 aaPredicted RBP16.04■□□□□ 0.16
TRIM39-205ENST00000396551 TMEM220Q6QAJ8 160 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 MSANTD1Q6ZTZ1 278 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 KLHDC8AQ8IYD2 350 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 NELL1Q92832 810 aa16.04■□□□□ 0.16
TRIM39-205ENST00000396551 C11orf24Q96F05 449 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms