RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ALBP02768 609 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 F7P08709 466 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 ERGP11308 486 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 ITGAXP20702 1163 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 MCM3P25205 808 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 RGS4P49798 205 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 MORF4L2Q15014 288 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 PAPD7Q5XG87 772 aaKnown RBP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 MRPL14Q6P1L8 145 aaKnown RBP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 SUSD1Q6UWL2 747 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 OVCH1Q7RTY7 1134 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 ATCAYQ86WG3 371 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 HPS6Q86YV9 775 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 SPNS2Q8IVW8 549 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 CPNE9Q8IYJ1 553 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 AGGF1Q8N302 714 aaeCLIP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 FBXO15Q8NCQ5 510 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 COL26A1Q96A83 441 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 NACC2Q96BF6 587 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 VPS50Q96JG6 964 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 SLC30A3Q99726 388 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 ZFYVE21Q9BQ24 234 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 AARSD1Q9BTE6 412 aaKnown RBP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 WDR54Q9H977 334 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 ABCF3Q9NUQ8 709 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 GPR83Q9NYM4 423 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 NXT1Q9UKK6 140 aaKnown RBP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 TLN1Q9Y490 2541 aaKnown RBP13.16□□□□□ -0.3
CXCL12-205ENST00000395794 TENM4Q6N022 2769 aa13.16□□□□□ -0.3
CXCL12-205ENST00000395794 SPTA1P02549 2419 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 A0A1W2PPV9 198 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 FITM1A5D6W6 292 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 USP27XA6NNY8 438 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 TTLL8A6PVC2 850 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 CCDC188H7C350 402 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 NDC80O14777 642 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 DPM1O60762 260 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 CEACAM4O75871 244 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 SLC16A8O95907 504 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 ALPPP05187 535 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 PYGBP11216 843 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 CARSP49589 748 aaKnown RBP13.15□□□□□ -0.3
CXCL12-205ENST00000395794 ABATP80404 500 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 PRDX1Q06830 199 aaKnown RBP13.15□□□□□ -0.3
CXCL12-205ENST00000395794 COLEC12Q5KU26 742 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 ICE2Q659A1 982 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 FRMPD2BQ6IN97 320 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 PRMT9Q6P2P2 845 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 KIAA0408Q6ZU52 694 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 UBE2R2Q712K3 238 aaPredicted RBP13.15□□□□□ -0.3
CXCL12-205ENST00000395794 RNF44Q7L0R7 432 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 ADCK2Q7Z695 626 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 CREG2Q8IUH2 290 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 C2CD4AQ8NCU7 369 aaPredicted RBP13.15□□□□□ -0.3
CXCL12-205ENST00000395794 FDCSPQ8NFU4 85 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 GIMAP7Q8NHV1 300 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 CD200R1Q8TD46 325 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 MCOLN3Q8TDD5 553 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 ZNF480Q8WV37 535 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 RERGQ96A58 199 aaPredicted RBP13.15□□□□□ -0.3
CXCL12-205ENST00000395794 ZNF285Q96NJ3 590 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 PLCD4Q9BRC7 762 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 MLXIPLQ9NP71 852 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 ENAMQ9NRM1 1142 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 P4HTMQ9NXG6 502 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 RNF14Q9UBS8 474 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 TAC3Q9UHF0 121 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 CDC23Q9UJX2 597 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 CDC14AQ9UNH5 594 aa13.15□□□□□ -0.3
CXCL12-205ENST00000395794 LOC105369274A0A096LPK9 316 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 LOC102723532A0A0G2JNH3 316 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 OR2A25A4D2G3 310 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 E7ENX8 843 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 GFYI3L273 518 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 PRPF4O43172 522 aaKnown RBP eCLIP13.14□□□□□ -0.31
CXCL12-205ENST00000395794 ONECUT2O95948 504 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 PDGFAP04085 211 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 C8GP07360 202 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 HIST1H2AGP0C0S8 130 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-205ENST00000395794 EZRP15311 586 aaKnown RBP13.14□□□□□ -0.31
CXCL12-205ENST00000395794 HIST1H2ADP20671 130 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 GCGRP47871 477 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 OR1D4P47884 311 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 ARL4CP56559 192 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 FOXK1P85037 733 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 TAP2Q03519 686 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 OCA2Q04671 838 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 IGFBP7Q16270 282 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 HIF1AQ16665 826 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 MUM1Q2TAK8 710 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 DCAF10Q5QP82 559 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 IRAK1BP1Q5VVH5 260 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 PIWIL4Q7Z3Z4 852 aaKnown RBP13.14□□□□□ -0.31
CXCL12-205ENST00000395794 OR4N4Q8N0Y3 316 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 MYO1HQ8N1T3 1032 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 METTL27Q8N6F8 245 aaPredicted RBP13.14□□□□□ -0.31
CXCL12-205ENST00000395794 EFCAB3Q8N7B9 438 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 PPFIBP2Q8ND30 876 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 LRRC39Q96DD0 335 aa13.14□□□□□ -0.31
CXCL12-205ENST00000395794 CERS2Q96G23 380 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms