RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 NADKO95544 446 aaPredicted RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 MT-ND2P03891 347 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 ITGALP20701 1170 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 KEAP1Q14145 624 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 PGS1Q32NB8 556 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 INO80DQ53TQ3 878 aaPredicted RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 TMEM236Q5W0B7 351 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 KDM4DQ6B0I6 523 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 OR2T5Q6IEZ7 315 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 METTL2BQ6P1Q9 378 aaKnown RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 DOK6Q6PKX4 331 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 OR2T29Q8NH02 315 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 C2orf15Q8WU43 125 aaKnown RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 BADQ92934 168 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 POP5Q969H6 163 aaKnown RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 BTBD2Q9BX70 525 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 RMND5AQ9H871 391 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 ZFYVE1Q9HBF4 777 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 CCNDBP1O95273 360 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 EFEMP2O95967 443 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 KRT6AP02538 564 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 KRT6BP04259 564 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 BMP4P12644 408 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 RPL17P18621 184 aaKnown RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 HALP42357 657 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 KRT6CP48668 564 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 DGUOKQ16854 277 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 SYT6Q5T7P8 510 aaPredicted RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 CCDC81Q6ZN84 652 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 P2RY8Q86VZ1 359 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 BEND7Q8N7W2 519 aaPredicted RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 DYNC2LI1Q8TCX1 351 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 IGSF21Q96ID5 467 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 TM6SF2Q9BZW4 377 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 RNF38Q9H0F5 515 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 TMEM165Q9HC07 324 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 FBXO8Q9NRD0 319 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 LATS2Q9NRM7 1088 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 CXXC1Q9P0U4 656 aaPredicted RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 SAMD4AQ9UPU9 718 aaKnown RBP17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 ERVW-1Q9UQF0 538 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 PCDHGA4Q9Y5G9 962 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 HSPE1-MOB4S4R3N1 261 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 KIAA1671Q9BY89 1806 aa17.84■□□□□ 0.45
PCDHA1-202ENST00000394633 K7ERQ8 282 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 SCAMP3O14828 347 aaKnown RBP17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 DIRAS1O95057 198 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 CLDN7O95471 211 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 CXCR4P61073 352 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 CLCA4Q14CN2 919 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 CHRNA6Q15825 494 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 INAQ16352 499 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 SMN1Q16637 294 aaKnown RBP17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 PAGE2BQ5JRK9 111 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 MACC1Q6ZN28 852 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 ADGRG2Q8IZP9 1017 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 OR6Q1Q8NGQ2 317 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 TTPALQ9BTX7 342 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 TM9SF3Q9HD45 589 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 IL1RAPQ9NPH3 570 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 ATAD3AQ9NVI7 634 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 VPS51Q9UID3 782 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 GMPPBQ9Y5P6 360 aa17.83■□□□□ 0.45
PCDHA1-202ENST00000394633 MYO1GB0I1T2 1018 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 ARHGEF15O94989 841 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 LRATO95237 230 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 PRPS2P11908 318 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 SDC1P18827 310 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 PSMB9P28065 219 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 NEK2P51955 445 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 SPOUT1Q5T280 376 aaKnown RBP17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 SELENOMQ8WWX9 145 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 MYOCQ99972 504 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 IL23AQ9NPF7 189 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 PCDH12Q9NPG4 1184 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 SCN3BQ9NY72 215 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 CRLS1Q9UJA2 301 aa17.83■□□□□ 0.44
PCDHA1-202ENST00000394633 SZT2Q5T011 3432 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 ZBBXA8MT70 800 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 H7C4K7 107 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 hCG_2039718K7EN88 272 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 TBL1XO60907 577 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 FADS2O95864 444 aaKnown RBP17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 BPIP17213 487 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 SYN1P17600 705 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 TGM1P22735 817 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 EPHA2P29317 976 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 HOXA9P31269 272 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 NCS1P62166 190 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 DGCR6Q14129 220 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 CDKN3Q16667 212 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 ZNF783Q6ZMS7 281 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 GALNT10Q86SR1 603 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 ADCK1Q86TW2 530 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 SLC22A15Q8IZD6 547 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 TESCQ96BS2 214 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 EGLN2Q96KS0 407 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 SLC32A1Q9H598 525 aa17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 THG1LQ9NWX6 298 aaKnown RBP17.82■□□□□ 0.44
PCDHA1-202ENST00000394633 OR51B4Q9Y5P0 310 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms