RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 CREBBPQ92793 2442 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 CNTRLQ7Z7A1 2325 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 A0A0U1RQJ8 604 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 ENO4A6NNW6 628 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 PFDN6O15212 129 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 ZGLP1P0C6A0 271 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 ATXN8OSP0DMR3 200 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 ACPPP15309 386 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 RPL22P35268 128 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 KLC1Q07866 573 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 Q0VFX4 171 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 CDC16Q13042 620 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 ARHGAP19Q14CB8 494 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 TYSND1Q2T9J0 566 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 PRTGQ2VWP7 1150 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 ZNF787Q6DD87 383 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 FRMPD2BQ6IN97 320 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 MRNIPQ6NTE8 343 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 PARP9Q8IXQ6 854 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 C1orf54Q8WWF1 131 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 MIEF2Q96C03 454 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 THOC3Q96J01 351 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 BIRC8Q96P09 236 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 MIPEPQ99797 713 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 ZFYVE21Q9BQ24 234 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 SLX1AQ9BQ83 275 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 KIFC1Q9BW19 673 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 TSGA10Q9BZW7 698 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 BFARQ9NZS9 450 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 CIDEBQ9UHD4 219 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 CDC14AQ9UNH5 594 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 NFS1Q9Y697 457 aa16.69■□□□□ 0.26
SNRPA1-202ENST00000394082 MAP2K7O14733 419 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 PRPF4O43172 522 aaKnown RBP eCLIP16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 USP1O94782 785 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 ESR1P03372 595 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 ETS1P14921 441 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 CMPK1P30085 196 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 HSD17B2P37059 387 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 INAQ16352 499 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 FBXO42Q6P3S6 717 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 SDCCAG8Q86SQ7 713 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 SKA2Q8WVK7 121 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 DESI2Q9BSY9 194 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 ZC3H7BQ9UGR2 993 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 C3orf18Q9UK00 162 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 MAU2Q9Y6X3 613 aa16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 MDC1Q14676 2089 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-202ENST00000394082 LOC105369274A0A096LPK9 316 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 LOC102723532A0A0G2JNH3 316 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 ALOX12BO75342 701 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 VPS26AO75436 327 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 MED26O95402 600 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 STSP08842 583 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 ARNTP27540 789 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 COL8A1P27658 744 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 PSMB5P28074 263 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 BDKRB1P46663 353 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 SESN2P58004 480 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 DSG2Q14126 1118 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 SIX1Q15475 284 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 CCSMST1Q4G0I0 132 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 ANKRD20A4Q4UJ75 823 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 CTSL3PQ5NE16 218 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 GARNL3Q5VVW2 1013 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 FAM180AQ6UWF9 173 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 RIPOR1Q6ZS17 1223 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 SHISA6Q6ZSJ9 500 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 NDUFAF7Q7L592 441 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 PRUNE1Q86TP1 453 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 KBTBD2Q8IY47 623 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 OR4N4Q8N0Y3 316 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 OR9A1PQ8NGU1 263 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 LPGAT1Q92604 370 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 C10orf90Q96M02 699 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 DPH7Q9BTV6 452 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 TGIF2Q9GZN2 237 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 RBSNQ9H1K0 784 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 C14orf105Q9NVL8 296 aa16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 UTP6Q9NYH9 597 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-202ENST00000394082 A0A0J9YVX5 310 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 A0A1B0GUH1 482 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 MYO1CO00159 1063 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 TXNDC9O14530 226 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 PSIP1O75475 530 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 KLHL18O94889 574 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 ZSCAN5DPP0CG00 497 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 ERVK-10P10266 1014 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 PKMP14618 531 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 NMBRP28336 390 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 SOX11P35716 441 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 SLC26A3P40879 764 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 EIF3BP55884 814 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 AP2B1P63010 937 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 SNX1Q13596 522 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 MEI1Q5TIA1 1274 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 ZNF324BQ6AW86 544 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 LRRC8BQ6P9F7 803 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 CNSTQ6PJW8 725 aa16.66■□□□□ 0.26
SNRPA1-202ENST00000394082 BCORP1Q8N888 145 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms