RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 KANSL1Q7Z3B3 1105 aa19.73■□□□□ 0.75
TSSC4-203ENST00000380996 ADGRF3Q8IZF5 1079 aa19.73■□□□□ 0.75
TSSC4-203ENST00000380996 KYQ8NBH2 561 aa19.73■□□□□ 0.75
TSSC4-203ENST00000380996 RFWD2Q8NHY2 731 aa19.73■□□□□ 0.75
TSSC4-203ENST00000380996 PTCD3Q96EY7 689 aaKnown RBP19.73■□□□□ 0.75
TSSC4-203ENST00000380996 SLC38A3Q99624 504 aa19.73■□□□□ 0.75
TSSC4-203ENST00000380996 CCT7Q99832 543 aa19.73■□□□□ 0.75
TSSC4-203ENST00000380996 APOBEC2Q9Y235 224 aaKnown RBP19.73■□□□□ 0.75
TSSC4-203ENST00000380996 RNF11Q9Y3C5 154 aa19.73■□□□□ 0.75
TSSC4-203ENST00000380996 TDRD6O60522 2096 aaKnown RBP19.73■□□□□ 0.75
TSSC4-203ENST00000380996 PIPSLA2A3N6 862 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 OR6C74A6NCV1 312 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 LILRA5A6NI73 299 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 RHPN2P1A8MT19 583 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 ISM1B1AKI9 464 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 GIMD1P0DJR0 217 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 C1GALT1C1LP0DN25 315 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 JUPP14923 745 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 ENGP17813 658 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 ARFIP2P53365 341 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 FOXA1P55317 472 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 PRDX1Q06830 199 aaKnown RBP19.72■□□□□ 0.75
TSSC4-203ENST00000380996 SF3A3Q12874 501 aaKnown RBP eCLIP19.72■□□□□ 0.75
TSSC4-203ENST00000380996 DOC2AQ14183 400 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 PDCD2Q16342 344 aaPredicted RBP19.72■□□□□ 0.75
TSSC4-203ENST00000380996 UGT3A2Q3SY77 523 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 ICE2Q659A1 982 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 ATG9BQ674R7 924 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 NXPE4Q6UWF7 544 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 SLCO4C1Q6ZQN7 724 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 TMPRSS11BQ86T26 416 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 GATAD2AQ86YP4 633 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 ANKS4BQ8N8V4 417 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 OR2A1Q8NGT9 310 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 OR4C6Q8NH72 309 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 CCT6BQ92526 530 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 KCNA7Q96RP8 456 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 EFCAB11Q9BUY7 163 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 TIMM22Q9Y584 194 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 DNAJC15Q9Y5T4 150 aa19.72■□□□□ 0.75
TSSC4-203ENST00000380996 ARHGEF17Q96PE2 2063 aaPredicted RBP19.72■□□□□ 0.75
TSSC4-203ENST00000380996 BTN3A3O00478 584 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 PPM1DO15297 605 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 PRICKLE3O43900 615 aaPredicted RBP19.71■□□□□ 0.75
TSSC4-203ENST00000380996 PCDHGA12O60330 932 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 KRT6AP02538 564 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 KRT6BP04259 564 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 KRT6CP48668 564 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 LAPTM5Q13571 262 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 E2F2Q14209 437 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 SF1Q15637 639 aaKnown RBP19.71■□□□□ 0.75
TSSC4-203ENST00000380996 CCDC6Q16204 474 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 PAGE2BQ5JRK9 111 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 ARMC6Q6NXE6 501 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 OOSP2Q86WS3 158 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 CACNA2D3Q8IZS8 1091 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 CCDC197Q8NCU1 140 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 TWIST2Q8WVJ9 160 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 WDR34Q96EX3 536 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 PLCD4Q9BRC7 762 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 NUF2Q9BZD4 464 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 PELI2Q9HAT8 420 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 KCNK13Q9HB14 408 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 SPHK1Q9NYA1 384 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 SNX6Q9UNH7 406 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 ARL2BPQ9Y2Y0 163 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 ZNF318Q5VUA4 2279 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 C2orf74A8MZ97 194 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 ZNF195O14628 629 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 NUDT21O43809 227 aaKnown RBP19.71■□□□□ 0.75
TSSC4-203ENST00000380996 CDH1P12830 882 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 HRH2P25021 359 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 CXCR2P25025 360 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 PSMB5P28074 263 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 SERPINB3P29508 390 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 CMPK1P30085 196 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 TCF15Q12870 199 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 CPSF6Q16630 551 aaKnown RBP eCLIP19.71■□□□□ 0.75
TSSC4-203ENST00000380996 HIST2H2ACQ16777 129 aaPredicted RBP19.71■□□□□ 0.75
TSSC4-203ENST00000380996 HIST2H2AA3Q6FI13 130 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 GRHL2Q6ISB3 625 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 EPGNQ6UW88 154 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 SLC35F3Q8IY50 421 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 MINDY1Q8N5J2 469 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 OR6C4Q8NGE1 309 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 OR10G6Q8NH81 332 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 C10orf82Q8WW14 230 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 STON2Q8WXE9 905 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 SEC16BQ96JE7 1060 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 TMEM120AQ9BXJ8 343 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 TWSG1Q9GZX9 223 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 SMOC1Q9H4F8 434 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 MRPS30Q9NP92 439 aaKnown RBP19.71■□□□□ 0.75
TSSC4-203ENST00000380996 HRASLS2Q9NWW9 162 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.71■□□□□ 0.75
TSSC4-203ENST00000380996 LRIT1Q9P2V4 623 aa19.71■□□□□ 0.75
TSSC4-203ENST00000380996 PI4KAP42356 2102 aa19.7■□□□□ 0.74
TSSC4-203ENST00000380996 GSAPA4D1B5 854 aa19.7■□□□□ 0.74
TSSC4-203ENST00000380996 PRAMEF4O60810 478 aa19.7■□□□□ 0.74
TSSC4-203ENST00000380996 DIAPH2O60879 1101 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms