RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 SEMA3GQ9NS98 782 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC9A8Q9Y2E8 581 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 OARD1Q9Y530 152 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 NUMA1Q14980 2115 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 FOXD2O60548 495 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ADRB3P13945 408 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 DGCR6Q14129 220 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 GNA13Q14344 377 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 GRIN2CQ14957 1233 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 HNRNPA1L2Q32P51 320 aaKnown RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 CNTN4Q8IWV2 1026 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ADAMTS15Q8TE58 950 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ISG20Q96AZ6 181 aaKnown RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 TMEM74Q96NL1 305 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 CCDC106Q9BWC9 280 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 CHID1Q9BWS9 393 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 TRIM39Q9HCM9 518 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 DNAAF2Q9NVR5 837 aaKnown RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ENOPH1Q9UHY7 261 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 KLHL20Q9Y2M5 609 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 FADS3Q9Y5Q0 445 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 RFXAPO00287 272 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 SCELO95171 688 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 STATHP02808 62 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 KLK1P06870 262 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 MYCLP1P12525 358 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 GSK3BP49841 420 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 CDH15P55291 814 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 MEF2AQ02078 507 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ZNF234Q14588 700 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 LIMS2Q7Z4I7 341 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 GPR135Q8IZ08 494 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 CBARPQ8N350 705 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 WFDC5Q8TCV5 224 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 GLMNQ92990 594 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 RAB11FIP5Q9BXF6 653 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 TPRKBQ9Y3C4 175 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 GMPPBQ9Y5P6 360 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ZBTB11O95625 1053 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 NUDT14O95848 222 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 CYP17A1P05093 508 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 SERPINB1P30740 379 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 NTSR1P30989 418 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 SPIBQ01892 262 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 TNFAIP8L3Q5GJ75 292 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 FBXO27Q8NI29 283 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 ZFRQ96KR1 1074 aaKnown RBP13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 SEC14L3Q9UDX4 400 aa13.8□□□□□ -0.2
SHROOM1-203ENST00000378679 HNRNPCL2B2RXH8 293 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 G3V2T6 193 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 CXCR6O00574 342 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 ZDHHC11BP0C7U3 371 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 CKMT2P17540 419 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 XIAPP98170 497 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 RUNX1T1Q06455 604 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 SFT2D3Q587I9 215 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 TMEM214Q6NUQ4 689 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 OR4E2Q8NGC2 313 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 POP5Q969H6 163 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 WBP2Q969T9 261 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 ASB9Q96DX5 294 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC38A3Q99624 504 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 PRRG3Q9BZD7 231 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 TMEM245Q9H330 911 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 SUCOQ9UBS9 1254 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 HEBP2Q9Y5Z4 205 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 TRMUO75648 421 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 PDE9AO76083 593 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 BCL10O95999 233 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 UMPSP11172 480 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 NOS3P29474 1203 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC6A11P48066 632 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 RPS13P62277 151 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 RPS21P63220 83 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 PRKCQQ04759 706 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 C18orf21Q32NC0 220 aaPredicted RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 DEF8Q6ZN54 512 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 KBTBD6Q86V97 674 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC5A11Q8WWX8 675 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 CENPNQ96H22 339 aaPredicted RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 IL17FQ96PD4 163 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 PIAS3Q9Y6X2 628 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 A0A1W2PRB8 838 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 CLIC1O00299 241 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 NDUFS1P28331 727 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 STXBP1P61764 594 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 NADK2Q4G0N4 442 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 GCNT6Q5T4J0 391 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 CGB2Q6NT52 195 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 PPP4R4Q6NUP7 873 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 ABRAXAS1Q6UWZ7 409 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 CEP68Q76N32 757 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 RTL10Q7L3V2 364 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 HSD11B1LQ7Z5J1 315 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 TRIM69Q86WT6 500 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 RORBQ92753 470 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 BRINP2Q9C0B6 783 aa13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 OAS3Q9Y6K5 1087 aaKnown RBP13.79□□□□□ -0.2
SHROOM1-203ENST00000378679 OR10H3O60404 316 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 CENPAP49450 140 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms