RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 CARD16Q5EG05 197 aa17.67■□□□□ 0.42
TDP2-202ENST00000378198 SPOUT1Q5T280 376 aaKnown RBP17.67■□□□□ 0.42
TDP2-202ENST00000378198 ZNF551Q7Z340 670 aaPredicted RBP17.67■□□□□ 0.42
TDP2-202ENST00000378198 BBS7Q8IWZ6 715 aa17.67■□□□□ 0.42
TDP2-202ENST00000378198 EGLN2Q96KS0 407 aa17.67■□□□□ 0.42
TDP2-202ENST00000378198 FCRL1Q96LA6 429 aa17.67■□□□□ 0.42
TDP2-202ENST00000378198 CCDC90BQ9GZT6 254 aa17.67■□□□□ 0.42
TDP2-202ENST00000378198 ABCG8Q9H221 673 aa17.67■□□□□ 0.42
TDP2-202ENST00000378198 VNN3Q9NY84 501 aa17.67■□□□□ 0.42
TDP2-202ENST00000378198 TDRKHQ9Y2W6 561 aaKnown RBP17.67■□□□□ 0.42
TDP2-202ENST00000378198 CLIC1O00299 241 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 FPGTO14772 594 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 KPNA5O15131 536 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 B3GALT4O96024 378 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 CXCL10P02778 98 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 FTH1P02794 183 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 JUPP14923 745 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 LHCGRP22888 699 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 GP2P55259 537 aaKnown RBP17.66■□□□□ 0.42
TDP2-202ENST00000378198 SLC14A1Q13336 389 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 GTF2H3Q13889 308 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 SPCS2Q15005 226 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 VMACQ2NL98 169 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.66■□□□□ 0.42
TDP2-202ENST00000378198 DCDC5Q6ZRR9 648 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 CYP2U1Q7Z449 544 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 CYP4Z1Q86W10 505 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 OR10Q1Q8NGQ4 319 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 CNIH3Q8TBE1 160 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 MCOLN3Q8TDD5 553 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 PYCR2Q96C36 320 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 TMEM169Q96HH4 297 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 HHIPL1Q96JK4 782 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 CPEB1Q9BZB8 566 aaKnown RBP17.66■□□□□ 0.42
TDP2-202ENST00000378198 SLC22A14Q9Y267 594 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 TPRKBQ9Y3C4 175 aa17.66■□□□□ 0.42
TDP2-202ENST00000378198 CFAP99D6REC4 459 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 MITFO75030 526 aaPredicted RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 INMTO95050 263 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 ATP1B2P14415 290 aaPredicted RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 JUNDP17535 347 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 GPX2P18283 190 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 DNAJA1P31689 397 aaKnown RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 HALP42357 657 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 CXCR4P61073 352 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 EMX1Q04741 257 aaPredicted RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 AQP6Q13520 282 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 NR1D2Q14995 579 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 SLC44A4Q53GD3 710 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 CAPN13Q6MZZ7 669 aaPredicted RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 ZCCHC8Q6NZY4 707 aaKnown RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 ABHD11Q8NFV4 315 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 PANX1Q96RD7 426 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 REXO4Q9GZR2 422 aaKnown RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 EXD2Q9NVH0 621 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 CFAP97Q9P2B7 532 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 ABCG2Q9UNQ0 655 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 COL4A6Q14031 1691 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 EPN2O95208 641 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 FABP3P05413 133 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 CKMP06732 381 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 C1SP09871 688 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 OCM2P0CE71 109 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 OCMP0CE72 109 aaPredicted RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 ENGP17813 658 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 FPR1P21462 350 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 SPINT3P49223 89 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 DAPP51397 102 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 CSTF3Q12996 717 aaKnown RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 CHIT1Q13231 466 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 LIPJQ5W064 366 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 KDM4DQ6B0I6 523 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 C22orf39Q6P5X5 142 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 RFLNAQ6ZTI6 216 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 NEK10Q6ZWH5 1172 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 GALNT5Q7Z7M9 940 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 SYT12Q8IV01 421 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 VRK3Q8IV63 474 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 ZZZ3Q8IYH5 903 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 FAR1Q8WVX9 515 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 MRPS31Q92665 395 aaKnown RBP17.65■□□□□ 0.42
TDP2-202ENST00000378198 P2RY13Q9BPV8 354 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 SCN3BQ9NY72 215 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 CORINQ9Y5Q5 1042 aa17.65■□□□□ 0.42
TDP2-202ENST00000378198 J3QRK9 145 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 UGDHO60701 494 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 PRAMEF4O60810 478 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 KCNK5O95279 499 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 SEMG1P04279 462 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 URODP06132 367 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 GABRR2P28476 465 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 KDELR2P33947 212 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 CTSOP43234 321 aaPredicted RBP17.64■□□□□ 0.41
TDP2-202ENST00000378198 STK19P49842 368 aaPredicted RBP17.64■□□□□ 0.41
TDP2-202ENST00000378198 PHEXP78562 749 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 SLC7A9P82251 487 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 CYP4F8P98187 520 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 CTF1Q16619 201 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 PRAMEF9Q5VWM5 478 aa17.64■□□□□ 0.41
TDP2-202ENST00000378198 CEP68Q76N32 757 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms