RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 GRIA3P42263 894 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 DHX34Q14147 1143 aaKnown RBP18.34■□□□□ 0.53
CBWD3-204ENST00000377349 OVCH1Q7RTY7 1134 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 DTWD1Q8N5C7 304 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 TM9SF4Q92544 642 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 DLG3Q92796 817 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 NAP1L3Q99457 506 aaPredicted RBP18.34■□□□□ 0.53
CBWD3-204ENST00000377349 WDR54Q9H977 334 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 TRMT1Q9NXH9 659 aaKnown RBP18.34■□□□□ 0.53
CBWD3-204ENST00000377349 MAD1L1Q9Y6D9 718 aa18.34■□□□□ 0.53
CBWD3-204ENST00000377349 GOLGA6L10A0A0M3HER8 536 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 E2F3O00716 465 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 DSCR3O14972 297 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 PRICKLE3O43900 615 aaPredicted RBP18.33■□□□□ 0.53
CBWD3-204ENST00000377349 ALAS2P22557 587 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 RPS3P23396 243 aaKnown RBP eCLIP18.33■□□□□ 0.53
CBWD3-204ENST00000377349 PSMB5P28074 263 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 THOC5Q13769 683 aaKnown RBP18.33■□□□□ 0.53
CBWD3-204ENST00000377349 HIF1AQ16665 826 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 CCSMST1Q4G0I0 132 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 PRAMEF13Q5VWM6 474 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 ZNF470Q6ECI4 717 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 KIAA0930Q6ICG6 404 aaPredicted RBP18.33■□□□□ 0.53
CBWD3-204ENST00000377349 KIRREL2Q6UWL6 708 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 OR2L8Q8NGY9 312 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 PPP4R1Q8TF05 950 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 LPGAT1Q92604 370 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 RAD51AP1Q96B01 352 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 SLC22A18Q96BI1 424 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 C5orf34Q96MH7 638 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 WDR77Q9BQA1 342 aaPredicted RBP18.33■□□□□ 0.53
CBWD3-204ENST00000377349 MESP1Q9BRJ9 268 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 GRPEL1Q9HAV7 217 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 INTS7Q9NVH2 962 aaKnown RBP18.33■□□□□ 0.53
CBWD3-204ENST00000377349 CTSFQ9UBX1 484 aa18.33■□□□□ 0.53
CBWD3-204ENST00000377349 NOVA2Q9UNW9 492 aaKnown RBP18.33■□□□□ 0.53
CBWD3-204ENST00000377349 MED26O95402 600 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 ALBP02768 609 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 ITGA3P26006 1051 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 GLRBP48167 497 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 ARSFP54793 590 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 PPP1R7Q15435 360 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 NEPROQ6NW34 567 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 CAND1Q86VP6 1230 aaKnown RBP18.32■□□□□ 0.52
CBWD3-204ENST00000377349 RASGEF1CQ8N431 466 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 ST6GALNAC3Q8NDV1 305 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 COG1Q8WTW3 980 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 MIPEPQ99797 713 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 RAB11FIP5Q9BXF6 653 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 CUTCQ9NTM9 273 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 ABCF3Q9NUQ8 709 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 CDC23Q9UJX2 597 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 PKDREJQ9NTG1 2253 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.32■□□□□ 0.52
CBWD3-204ENST00000377349 FITM1A5D6W6 292 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 ZSCAN12O43309 604 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 CTSVO60911 334 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 C1orf105O95561 183 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 S1PR4O95977 384 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 TYSND1Q2T9J0 566 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 FIGLAQ6QHK4 219 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 SHISA6Q6ZSJ9 500 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 KCNMB4Q86W47 210 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 METTL27Q8N6F8 245 aaPredicted RBP18.32■□□□□ 0.52
CBWD3-204ENST00000377349 BIRC8Q96P09 236 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 SERPINB12Q96P63 405 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 OSBPL9Q96SU4 736 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 ACAT2Q9BWD1 397 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 CCDC68Q9H2F9 335 aa18.32■□□□□ 0.52
CBWD3-204ENST00000377349 XAB2Q9HCS7 855 aaKnown RBP18.32■□□□□ 0.52
CBWD3-204ENST00000377349 FBXO6Q9NRD1 293 aaPredicted RBP18.32■□□□□ 0.52
CBWD3-204ENST00000377349 SDR42E2A6NKP2 422 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 VSTM2BA6NLU5 285 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 H3BMM5 538 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 KIF5CO60282 957 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 NRP2O60462 931 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 PHF2O75151 1096 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 ESR1P03372 595 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 OGNP20774 298 aaKnown RBP18.31■□□□□ 0.52
CBWD3-204ENST00000377349 Q0VFX4 171 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 ANKRD20A4Q4UJ75 823 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 CILP2Q8IUL8 1156 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 GRK7Q8WTQ7 553 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 SOX17Q9H6I2 414 aaPredicted RBP18.31■□□□□ 0.52
CBWD3-204ENST00000377349 C20orf96Q9NUD7 363 aaPredicted RBP18.31■□□□□ 0.52
CBWD3-204ENST00000377349 GALPQ9UBC7 116 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 MRFAP1Q9Y605 127 aa18.31■□□□□ 0.52
CBWD3-204ENST00000377349 CSMD2Q7Z408 3487 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 SYF2O95926 243 aaKnown RBP18.3■□□□□ 0.52
CBWD3-204ENST00000377349 PKMP14618 531 aaKnown RBP18.3■□□□□ 0.52
CBWD3-204ENST00000377349 CCNFP41002 786 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 TSFMP43897 325 aaKnown RBP18.3■□□□□ 0.52
CBWD3-204ENST00000377349 OR1D4P47884 311 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 CTBP1Q13363 440 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 CUL1Q13616 776 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 ACSBG2Q5FVE4 666 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 YOD1Q5VVQ6 348 aaPredicted RBP18.3■□□□□ 0.52
CBWD3-204ENST00000377349 DENND6AQ8IWF6 608 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 OR11G2Q8NGC1 345 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 MAGEC3Q8TD91 643 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms