RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 SCRN2Q96FV2 425 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 ABCB8Q9NUT2 735 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 PCDHGB1Q9Y5G3 927 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 PIKFYVEQ9Y2I7 2098 aa24.58■■□□□ 1.53
C9orf40-201ENST00000376854 PABPN1LA6NDY0 278 aaKnown RBP24.57■■□□□ 1.52
C9orf40-201ENST00000376854 EIF3FO00303 357 aaPredicted RBP24.57■■□□□ 1.52
C9orf40-201ENST00000376854 C1QCP02747 245 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 FMO3P31513 532 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 CD70P32970 193 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 OPRL1P41146 370 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 SLC6A12P48065 614 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 PTSQ03393 145 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 RGS21Q2M5E4 152 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 MSANTD1Q6ZTZ1 278 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 PIWIL3Q7Z3Z3 882 aaKnown RBP24.57■■□□□ 1.52
C9orf40-201ENST00000376854 B3GNT8Q7Z7M8 397 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 IGFN1Q86VF2 1251 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 ELMOD1Q8N336 334 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 HHIPQ96QV1 700 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 TM9SF3Q9HD45 589 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 ERVK-18Q9QC07 812 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 SLC22A14Q9Y267 594 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 AXIN1O15169 862 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 MAN1A2O60476 641 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 HNMTP50135 292 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 DAPP51397 102 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 FRG2Q64ET8 278 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 NOXRED1Q6NXP6 359 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 PARP8Q8N3A8 854 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 TMCO5AQ8N6Q1 288 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 SLAIN1Q8ND83 568 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 FRG2BQ96QU4 278 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 EBPLQ9BY08 206 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 SH3GLB1Q9Y371 365 aa24.57■■□□□ 1.52
C9orf40-201ENST00000376854 FUOMA2VDF0 154 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 FPGTO14772 594 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 FUCA1P04066 466 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 ITPKAP23677 461 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 FSHRP23945 695 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 DUOXA1Q1HG43 343 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 PLEKHG6Q3KR16 790 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 SPOUT1Q5T280 376 aaKnown RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 USP45Q70EL2 814 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 CYP2U1Q7Z449 544 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 VRK3Q8IV63 474 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 RORBQ92753 470 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 PANX1Q96RD7 426 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 ZNF347Q96SE7 839 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 REXO4Q9GZR2 422 aaKnown RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 KIAA1522Q9P206 1035 aaPredicted RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 MBD1Q9UIS9 605 aaPredicted RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 LSM7Q9UK45 103 aaKnown RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 INTS6Q9UL03 887 aaKnown RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 KRT87PA6NCN2 255 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 SOBPA7XYQ1 873 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 hCG_2039718K7EN88 272 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 CLIC1O00299 241 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 PRAMEF4O60810 478 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 ENGP17813 658 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 HALP42357 657 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 TRPC1P48995 793 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 CLK3P49761 638 aaKnown RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 EPHB3P54753 998 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 OCA2Q04671 838 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 ACOX1Q15067 660 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 PRAMEF9Q5VWM5 478 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 CAPN13Q6MZZ7 669 aaPredicted RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 GALNT10Q86SR1 603 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 METTL3Q86U44 580 aaKnown RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 RNF175Q8N4F7 328 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 CSGALNACT1Q8TDX6 532 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 SH3YL1Q96HL8 342 aaPredicted RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 ZNF641Q96N77 438 aaPredicted RBP24.56■■□□□ 1.52
C9orf40-201ENST00000376854 AASSQ9UDR5 926 aa24.56■■□□□ 1.52
C9orf40-201ENST00000376854 NPIPB8E9PQR5 432 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 NUAK1O60285 661 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 DIRAS1O95057 198 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 OLFM2O95897 454 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 SOD2P04179 222 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 IMPDH2P12268 514 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 PCSK2P16519 638 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 PRPS1L1P21108 318 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 LHCGRP22888 699 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 CD97P48960 835 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 STK19P49842 368 aaPredicted RBP24.55■■□□□ 1.52
C9orf40-201ENST00000376854 HNRNPFP52597 415 aaKnown RBP24.55■■□□□ 1.52
C9orf40-201ENST00000376854 MTAPQ13126 283 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 KEAP1Q14145 624 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 GBX1Q14549 363 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 KDM4DQ6B0I6 523 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 OR7A2PQ8NGA2 310 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 VOPP1Q96AW1 172 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 P2RY13Q9BPV8 354 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 DNAJC11Q9NVH1 559 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 TPRKBQ9Y3C4 175 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 IGLV3-16A0A075B6K0 115 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 CXCL10P02778 98 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 FABP3P05413 133 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 ACPPP15309 386 aa24.55■■□□□ 1.52
C9orf40-201ENST00000376854 IDUAP35475 653 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms