RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	SLC22A3	O75751	556 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	NCK1	P16333	377 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	CXCR2	P25025	360 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	TNFRSF4	P43489	277 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	FRG1	Q14331	258 aa	Known RBP	13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ZNF678	Q5SXM1	525 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	FRG2	Q64ET8	278 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	TRIM40	Q6P9F5	258 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	AMIGO1	Q86WK6	493 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ADCY4	Q8NFM4	1077 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	PPCDC	Q96CD2	204 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	FRG2B	Q96QU4	278 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	TRIB3	Q96RU7	358 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	EFHD1	Q9BUP0	239 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ASPSCR1	Q9BZE9	553 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	GAREM1	Q9H706	876 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	OR10H1	Q9Y4A9	318 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ADAM23	O75077	832 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	SNRPB2	P08579	225 aa	Known RBP	13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	G6PD	P11413	515 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	UFM1	P61960	85 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	TGM3	Q08188	693 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ELOC	Q15369	112 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	TCEAL6	Q6IPX3	200 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	SCUBE1	Q8IWY4	988 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	KRTCAP2	Q8N6L1	136 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	GIMAP7	Q8NHV1	300 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	TCEAL3	Q969E4	200 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	RERGL	Q9H628	205 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	IGSF5	Q9NSI5	407 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	PI4KA	P42356	2102 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	MGAM	O43451	1857 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	MAGEB17	A8MXT2	336 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ATP6V1B2	P21281	511 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	CD9	P21926	228 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	PRKAA2	P54646	552 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ABRAXAS2	Q15018	415 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	DGLUCY	Q7Z3D6	616 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ADGRG6	Q86SQ4	1221 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	HPS6	Q86YV9	775 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	RNF145	Q96MT1	663 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	ASB1	Q9Y576	335 aa		13.12	□□□□□ -0.31
DDR1-225	ENST00000376568	CROCC	Q5TZA2	2017 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	SAC3D1	A6NKF1	404 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	NDUFB5	O43674	189 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	CCNA2	P20248	432 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	PNLIPRP1	P54315	467 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	XIAP	P98170	497 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	ERV3-1	Q14264	604 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	LRIT3	Q3SXY7	679 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	AASDH	Q4L235	1098 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	AGBL4	Q5VU57	503 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	AFMID	Q63HM1	303 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	LZIC	Q8WZA0	190 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	REPS1	Q96D71	796 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	PPP3R2	Q96LZ3	170 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	NLN	Q9BYT8	704 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	CD244	Q9BZW8	370 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	TBC1D29	Q9UFV1	150 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	NEU3	Q9UQ49	428 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	BCKDHB	P21953	392 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	MAPK1	P28482	360 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	MLLT3	P42568	568 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	RCN1	Q15293	331 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	OR4F3	Q6IEY1	312 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	KIAA1161	Q6NSJ0	714 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	NEIL2	Q969S2	332 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	FAM32A	Q9Y421	112 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	PCDHGA11	Q9Y5H2	935 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	NCOR2	Q9Y618	2525 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	ZNF839	A8K0R7	811 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	CELA2B	P08218	269 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	DRD3	P35462	400 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	IGFALS	P35858	605 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	IRX1	P78414	480 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	ALDH6A1	Q02252	535 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	CCIN	Q13939	588 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	PIP5KL1	Q5T9C9	394 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	ALKBH2	Q6NS38	261 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	LETMD1	Q6P1Q0	360 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	GKN2	Q86XP6	184 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	TMCO5A	Q8N6Q1	288 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	OR8K5	Q8NH50	307 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	SLC5A11	Q8WWX8	675 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	BIRC8	Q96P09	236 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	KCTD14	Q9BQ13	255 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	NUSAP1	Q9BXS6	441 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	HCN2	Q9UL51	889 aa		13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	FAF1	Q9UNN5	650 aa	Predicted RBP	13.11	□□□□□ -0.31
DDR1-225	ENST00000376568	KRBA1	A5PL33	1030 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	SGTA	O43765	313 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	PCDH7	O60245	1069 aa		13.1	□□□□□ -0.31
DDR1-225	ENST00000376568	GREM1	O60565	184 aa		13.1	□□□□□ -0.31

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