RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 KXD1Q9BQD3 176 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 CHID1Q9BWS9 393 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 YIPF3Q9GZM5 350 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 PAIP1Q9H074 479 aaKnown RBP12.98□□□□□ -0.33
CSTF2-201ENST00000372972 S1PR5Q9H228 398 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 ZNF696Q9H7X3 374 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 SERHLQ9NQF3 203 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 INVSQ9Y283 1065 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 PCDHB14Q9Y5E9 798 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 PCDHGA11Q9Y5H2 935 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 RNF103-CHMP3A0A140T963 221 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 C17orf113A0A1B0GUU1 675 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 ELOVL7A1L3X0 281 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 C1QTNF3-AMACRE9PGA6 284 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 PDLIM1O00151 329 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 LDLRP01130 860 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 HSD3B1P14060 373 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 PRPS1L1P21108 318 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 HSD3B2P26439 372 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 BMP8BP34820 402 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 PLOD1Q02809 727 aaPredicted RBP12.98□□□□□ -0.33
CSTF2-201ENST00000372972 RUNX3Q13761 415 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 GTF2H3Q13889 308 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 LIN52Q52LA3 116 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 CES5AQ6NT32 575 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 IYDQ6PHW0 289 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 MSANTD1Q6ZTZ1 278 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 SPRED1Q7Z699 444 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 GPR180Q86V85 440 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 CARM1Q86X55 608 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 EPHX4Q8IUS5 362 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 YAF2Q8IY57 180 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 RNF175Q8N4F7 328 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 CPA6Q8N4T0 437 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 ZNF548Q8NEK5 533 aaPredicted RBP12.98□□□□□ -0.33
CSTF2-201ENST00000372972 METTL2AQ96IZ6 378 aaKnown RBP12.98□□□□□ -0.33
CSTF2-201ENST00000372972 EGLN2Q96KS0 407 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 LINC00615Q96LM1 132 aaPredicted RBP12.98□□□□□ -0.33
CSTF2-201ENST00000372972 HHIPQ96QV1 700 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 MTERF1Q99551 399 aaKnown RBP12.98□□□□□ -0.33
CSTF2-201ENST00000372972 IKZF5Q9H5V7 419 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 BRF2Q9HAW0 419 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 SPATA6Q9NWH7 488 aaPredicted RBP12.98□□□□□ -0.33
CSTF2-201ENST00000372972 ATXN10Q9UBB4 475 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 CIDEBQ9UHD4 219 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 PPT2Q9UMR5 302 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 OAZ3Q9UMX2 235 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 GPR34Q9UPC5 381 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 KCNE2Q9Y6J6 123 aa12.98□□□□□ -0.33
CSTF2-201ENST00000372972 ACOX3O15254 700 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 VEGFDO43915 354 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 PRMT3O60678 531 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 RASAL1O95294 804 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 C7P10643 843 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 OPRD1P41143 372 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 GRIA2P42262 883 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 IL12RB1P42701 662 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 FAM98BQ52LJ0 330 aaKnown RBP12.97□□□□□ -0.33
CSTF2-201ENST00000372972 DNAJC14Q6Y2X3 702 aaPredicted RBP12.97□□□□□ -0.33
CSTF2-201ENST00000372972 TMEM132CQ8N3T6 1108 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 CXorf40AQ8TE69 158 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 FIG4Q92562 907 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 TFAP2CQ92754 450 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 RAB7BQ96AH8 199 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 BDH2Q9BUT1 245 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 HDAC8Q9BY41 377 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 KAT8Q9H7Z6 458 aaKnown RBP12.97□□□□□ -0.33
CSTF2-201ENST00000372972 SGK2Q9HBY8 427 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 PRSS16Q9NQE7 514 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 GPRC5BQ9NZH0 403 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 THAP10Q9P2Z0 257 aaPredicted RBP12.97□□□□□ -0.33
CSTF2-201ENST00000372972 RUVBL1Q9Y265 456 aaKnown RBP12.97□□□□□ -0.33
CSTF2-201ENST00000372972 COL4A3Q01955 1670 aa12.97□□□□□ -0.33
CSTF2-201ENST00000372972 MAP3K13O43283 966 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 POP7O75817 140 aaKnown RBP12.96□□□□□ -0.33
CSTF2-201ENST00000372972 LRATO95237 230 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 EPHX1P07099 455 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 SMIM18P0DKX4 95 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 RAP2AP10114 183 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 LAMP2P13473 410 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 GJA4P35212 333 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 P2RY2P41231 377 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 HNRNPFP52597 415 aaKnown RBP12.96□□□□□ -0.33
CSTF2-201ENST00000372972 SRSF11Q05519 484 aaKnown RBP12.96□□□□□ -0.33
CSTF2-201ENST00000372972 DDX39BQ13838 428 aaKnown RBP12.96□□□□□ -0.33
CSTF2-201ENST00000372972 DPY19L1Q2PZI1 675 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 GTDC1Q4AE62 458 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 PARM1Q6UWI2 310 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 EP400NLQ6ZTU2 488 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 SYT12Q8IV01 421 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 OR52E4Q8NGH9 312 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 ZNF480Q8WV37 535 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 INPP5KQ9BT40 448 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 UGT2B28Q9BY64 529 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 ANKRD60Q9BZ19 345 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 SLC6A13Q9NSD5 602 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 ADGRE2Q9UHX3 823 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 V9GYQ6 96 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 REV3LO60673 3130 aa12.96□□□□□ -0.33
CSTF2-201ENST00000372972 ZFC3H1O60293 1989 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms