RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 CDKL4Q5MAI5 379 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 EEF1A1P5Q5VTE0 462 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SUSD4Q5VX71 490 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 PYHIN1Q6K0P9 492 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 TMEM107Q6UX40 140 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 UNC5DQ6UXZ4 953 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 RAB11FIP2Q7L804 512 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SPATA19Q7Z5L4 167 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 HSD17B13Q7Z5P4 300 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 RAB44Q7Z6P3 723 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 KCNMB4Q86W47 210 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 XYLT1Q86Y38 959 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 CAMKVQ8NCB2 501 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 C19orf18Q8NEA5 215 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 OR1M1Q8NGA1 313 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 GPR152Q8TDT2 470 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 TRMT2BQ96GJ1 504 aaKnown RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 EXOC2Q96KP1 924 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 OR5M11Q96RB7 305 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 RTP3Q9BQQ7 232 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 RHNO1Q9BSD3 238 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 RIBC2Q9H4K1 309 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SPON1Q9HCB6 807 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 EQTNQ9NQ60 294 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 KCMF1Q9P0J7 381 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 TSR3Q9UJK0 312 aaKnown RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 PCDHGB7Q9Y5F8 929 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 ITGB4P16144 1822 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 A0A1B0GWJ7 208 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 FABP12A6NFH5 140 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 CHP2O43745 196 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 ADAMTS4O75173 837 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 CLN5O75503 358 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 GPX5O75715 221 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 MPC2O95563 127 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 LGI1O95970 557 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 C9P02748 559 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 FGF2P09038 288 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 CPB1P15086 417 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 BAG6P46379 1132 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 CLCN4P51793 760 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 TKTL1P51854 596 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 PLD1Q13393 1074 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SMAD2Q15796 467 aaKnown RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SMN1Q16637 294 aaKnown RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 PTCHD3Q3KNS1 767 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 MANEALQ5VSG8 457 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 KIAA1614Q5VZ46 1190 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 FAM92BQ6ZTR7 304 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 LAX1Q8IWV1 398 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 TBC1D19Q8N5T2 526 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 DPP10Q8N608 796 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 COLGALT1Q8NBJ5 622 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 OR8D4Q8NGM9 314 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 HTR3CQ8WXA8 447 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 ZDHHC12Q96GR4 267 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 SENP8Q96LD8 212 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 VAT1Q99536 393 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 WDR18Q9BV38 432 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 CD244Q9BZW8 370 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 MS4A7Q9GZW8 240 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-203ENST00000361528 OR51M1Q9H341 326 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 KRT84Q9NSB2 600 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 ENTPD4Q9Y227 616 aa11.29□□□□□ -0.6
CNOT4-203ENST00000361528 CBX4O00257 560 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 QSOX1O00391 747 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 ZBTB24O43167 697 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-203ENST00000361528 MED7O43513 233 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 WBP4O75554 376 aaKnown RBP11.28□□□□□ -0.6
CNOT4-203ENST00000361528 LYPLA2O95372 231 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 S100A9P06702 114 aaKnown RBP11.28□□□□□ -0.6
CNOT4-203ENST00000361528 PTBP1P26599 531 aaKnown RBP eCLIP11.28□□□□□ -0.68e-7■■■■□ 22.3
CNOT4-203ENST00000361528 ABATP80404 500 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 SIM2Q14190 667 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-203ENST00000361528 AP5B1Q2VPB7 878 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 NHLRC3Q5JS37 347 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 TEX30Q5JUR7 227 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 RGS7BPQ6MZT1 257 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-203ENST00000361528 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 BRINP3Q76B58 766 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 PHYKPLQ8IUZ5 450 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 MCATQ8IVS2 390 aaKnown RBP11.28□□□□□ -0.6
CNOT4-203ENST00000361528 EFHBQ8N7U6 833 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 TTC29Q8NA56 475 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-203ENST00000361528 OR6P1Q8NGX9 317 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 OR2T4Q8NH00 348 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 SLC5A11Q8WWX8 675 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 MRPL48Q96GC5 212 aaKnown RBP11.28□□□□□ -0.6
CNOT4-203ENST00000361528 MRGPRX2Q96LB1 330 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 MOGAT1Q96PD6 335 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 MCOLN1Q9GZU1 580 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 MED28Q9H204 178 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 TNFRSF12AQ9NP84 129 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 GKN1Q9NS71 199 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 TJP2Q9UDY2 1190 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 MINPP1Q9UNW1 487 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 MGAT4BQ9UQ53 548 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 RPH3AQ9Y2J0 694 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-203ENST00000361528 CSADQ9Y600 493 aa11.28□□□□□ -0.6
CNOT4-203ENST00000361528 GLYATL1P3A0A0U1RQE8 302 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms