RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 KCTD3Q9Y597 815 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 CCDC88AQ3V6T2 1871 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 ALS2Q96Q42 1657 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 CAPN8A6NHC0 703 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 REM1O75628 298 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 RUNX3Q13761 415 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 DUOXA1Q1HG43 343 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 FIBINQ8TAL6 211 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 SUN3Q8TAQ9 357 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 SNX33Q8WV41 574 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 C1GALT1C1Q96EU7 318 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 DENND2DQ9H6A0 471 aaPredicted RBP13.13□□□□□ -0.31
LDB3-202ENST00000361373 MS4A12Q9NXJ0 267 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 TAS2R1Q9NYW7 299 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 SATB2Q9UPW6 733 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 TSC22D4Q9Y3Q8 395 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 PCDHGB7Q9Y5F8 929 aa13.13□□□□□ -0.31
LDB3-202ENST00000361373 NR2C1P13056 603 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 SLC7A1P30825 629 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 MSS51Q4VC12 460 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 TNFAIP8L2Q6P589 184 aaPredicted RBP13.12□□□□□ -0.31
LDB3-202ENST00000361373 POMZP3Q6PJE2 187 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 KLHL17Q6TDP4 642 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 LMX1AQ8TE12 382 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 SLC35A5Q9BS91 424 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 CADM1Q9BY67 442 aaKnown RBP13.12□□□□□ -0.31
LDB3-202ENST00000361373 NSUN3Q9H649 340 aaKnown RBP13.12□□□□□ -0.31
LDB3-202ENST00000361373 MVB12BQ9H7P6 319 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 BDKRB1P46663 353 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 ABATP80404 500 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 ATP1A4Q13733 1029 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.12□□□□□ -0.31
LDB3-202ENST00000361373 GALNT7Q86SF2 657 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 PRSS58Q8IYP2 241 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 SCML4Q8N228 414 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 LRRC58Q96CX6 371 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 KXD1Q9BQD3 176 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 Q9N2J8 555 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 SCML1Q9UN30 329 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 C9JVG2 144 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 MAFKO60675 156 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 GSTM3P21266 225 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 HOXC12P31275 282 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 HNF1BP35680 557 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 GJA5P36382 358 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 LPCAT4Q643R3 524 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 MAPK15Q8TD08 544 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 DGCR14Q96DF8 476 aaKnown RBP13.12□□□□□ -0.31
LDB3-202ENST00000361373 SDHAF3Q9NRP4 125 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 SLC17A6Q9P2U8 582 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 DMTF1Q9Y222 760 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 E7ESA3 106 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 TGM5O43548 720 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 KLK1P06870 262 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 FAUP35544 74 aaKnown RBP13.12□□□□□ -0.31
LDB3-202ENST00000361373 RAPSNQ13702 412 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 LIPJQ5W064 366 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 GALNT5Q7Z7M9 940 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 PIM3Q86V86 326 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 CAND1Q86VP6 1230 aaKnown RBP13.12□□□□□ -0.31
LDB3-202ENST00000361373 OR4E2Q8NGC2 313 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 GEMIN6Q8WXD5 167 aaKnown RBP13.12□□□□□ -0.31
LDB3-202ENST00000361373 ZNF382Q96SR6 550 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 HHATLQ9HCP6 504 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 TESMINQ9Y4I5 508 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 SETD1AO15047 1707 aaKnown RBP13.12□□□□□ -0.31
LDB3-202ENST00000361373 TAF4O00268 1085 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 SLC30A4O14863 429 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 CASKO14936 926 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 HCN1O60741 890 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 CDH1P12830 882 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 HSD3B1P14060 373 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 HSD3B2P26439 372 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 ATP4BP51164 291 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 MTPNP58546 118 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 KLHL22Q53GT1 634 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 TOR1AIP1Q5JTV8 583 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 RASGRP3Q8IV61 690 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 OR52J3Q8NH60 311 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 ASB9Q96DX5 294 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 CDK15Q96Q40 435 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 KCNS3Q9BQ31 491 aa13.12□□□□□ -0.31
LDB3-202ENST00000361373 FAM72CH0Y354 149 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 PEX12O00623 359 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 TGFBR2P37173 567 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 BTN3A2P78410 334 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 ZNF630Q2M218 657 aaPredicted RBP13.11□□□□□ -0.31
LDB3-202ENST00000361373 FAM72AQ5TYM5 149 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 GPR107Q5VW38 600 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 FAM72DQ6L9T8 149 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 GPRIN1Q7Z2K8 1008 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 FAM72BQ86X60 149 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 MRGPRX2Q96LB1 330 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 FCRL4Q96PJ5 515 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 RASSF1Q9NS23 344 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 LILRB3O75022 631 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 SOX30O94993 753 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 NTSR1P30989 418 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 IL12RB1P42701 662 aa13.11□□□□□ -0.31
LDB3-202ENST00000361373 ABHD18Q0P651 414 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms