RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 AMIGO2Q86SJ2 522 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 PRODH2Q9UF12 536 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 TRIP12Q14669 1992 aaPredicted RBP9.46□□□□□ -0.89
CUX1-203ENST00000360264 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.46□□□□□ -0.89
CUX1-203ENST00000360264 GABRDO14764 452 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 ADH5P11766 374 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 SLC5A7Q9GZV3 580 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 ATPIF1Q9UII2 106 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 A0A0G2JLL6 359 aaPredicted RBP9.46□□□□□ -0.89
CUX1-203ENST00000360264 DHCR24Q15392 516 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 ZNF613Q6PF04 617 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 PRRT2Q7Z6L0 340 aaPredicted RBP9.46□□□□□ -0.89
CUX1-203ENST00000360264 MFSD2AQ8NA29 543 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 CMTM7Q96FZ5 175 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 SLC2A4RGQ9NR83 387 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 LGALS13Q9UHV8 139 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 ZFP37Q9Y6Q3 630 aaPredicted RBP9.46□□□□□ -0.89
CUX1-203ENST00000360264 PCDHGA12O60330 932 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 PEX14O75381 377 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 CWF19L1Q69YN2 538 aaKnown RBP9.46□□□□□ -0.89
CUX1-203ENST00000360264 BORAQ6PGQ7 559 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 OR5K1Q8NHB7 308 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 MND1Q9BWT6 205 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 TRPV4Q9HBA0 871 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 TMEM5Q9Y2B1 443 aa9.46□□□□□ -0.89
CUX1-203ENST00000360264 C5orf51A6NDU8 294 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 PFKLP17858 780 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 GRIA2P42262 883 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 MAZP56270 477 aaKnown RBP9.46□□□□□ -0.9
CUX1-203ENST00000360264 TOMM5Q8N4H5 51 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 CEP76Q8TAP6 659 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 SDCBP2Q9H190 292 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 KLRF1Q9NZS2 232 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 SCN2AQ99250 2005 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 GRXCR2A6NFK2 248 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 HRGP04196 525 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 KCNC3Q14003 757 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 CDK10Q15131 360 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 SYCE2Q6PIF2 218 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 CEP295NLQ96MC4 621 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 ARF3P61204 181 aaPredicted RBP9.46□□□□□ -0.9
CUX1-203ENST00000360264 ARF1P84077 181 aaKnown RBP9.46□□□□□ -0.9
CUX1-203ENST00000360264 RALGPS2Q86X27 583 aaPredicted RBP9.46□□□□□ -0.9
CUX1-203ENST00000360264 GPR152Q8TDT2 470 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 TELO2Q9Y4R8 837 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 TISP43B9A030 160 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 B4GALT5O43286 388 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 TBX1O43435 398 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 ATG12O94817 140 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 PRKCDQ05655 676 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 HERC3Q15034 1050 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 PRSS58Q8IYP2 241 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 SMPDL3AQ92484 453 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 KLHL5Q96PQ7 755 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 MAPKAP1Q9BPZ7 522 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 PCDHGA2Q9Y5H1 932 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 TP53I11O14683 189 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 FARS2O95363 451 aaKnown RBP9.46□□□□□ -0.9
CUX1-203ENST00000360264 DUOXA1Q1HG43 343 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 PLEKHN1Q494U1 663 aaPredicted RBP9.46□□□□□ -0.9
CUX1-203ENST00000360264 CAPNS2Q96L46 248 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 PNPOQ9NVS9 261 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 CNTN6Q9UQ52 1028 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 PCDHB14Q9Y5E9 798 aa9.46□□□□□ -0.9
CUX1-203ENST00000360264 DAPL1A0PJW8 107 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 UPK3BL1B0FP48 263 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 UPK3BL2E5RIL1 263 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 TREHO43280 583 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 SLC2A2P11168 524 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 PUM1Q14671 1186 aaKnown RBP eCLIP9.45□□□□□ -0.95e-7■■■□□ 14.6
CUX1-203ENST00000360264 FAM76BQ5HYJ3 339 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 KIAA0930Q6ICG6 404 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 DCUN1D3Q8IWE4 304 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 CPXM1Q96SM3 734 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 MECRQ9BV79 373 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ZNF471Q9BX82 626 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 GADD45GO95257 159 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ADH1BP00325 375 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 CDH1P12830 882 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 CDKN2BP42772 138 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 MTMR14Q8NCE2 650 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 OR52E4Q8NGH9 312 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 PMEPA1Q969W9 287 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 FCF1Q9Y324 198 aaKnown RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 DGKBQ9Y6T7 804 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 WASF2Q9Y6W5 498 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 PAX7P23759 505 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 HSPA7P48741 367 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 OC90Q02509 493 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 VMACQ2NL98 169 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 OR5B17Q8NGF7 314 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 GFM1Q96RP9 751 aaKnown RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 SLC22A4Q9H015 551 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ACTL8Q9H568 366 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 MRM3Q9HC36 420 aaKnown RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 LTN1O94822 1766 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 CPSF4LA6NMK7 179 aaKnown RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 CXCR6O00574 342 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 TAL1P17542 331 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 DGKZQ13574 1117 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms