RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 C12orf71A8MTZ7 269 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 NCF1CA8MVU1 366 aaPredicted RBP14.52□□□□□ -0.08
UBAP1-202ENST00000359544 PLK4O00444 970 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 PCDHGA12O60330 932 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 CDK1P06493 297 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 NCF1P14598 390 aaPredicted RBP14.52□□□□□ -0.08
UBAP1-202ENST00000359544 CCR1P32246 355 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 MLLT3P42568 568 aaPredicted RBP14.52□□□□□ -0.08
UBAP1-202ENST00000359544 IL12RB1P42701 662 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 RFX2P48378 723 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 LIMK1P53667 647 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 GPNMBQ14956 572 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 TCTN1Q2MV58 587 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 AP5B1Q2VPB7 878 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 MLIPQ5VWP3 458 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 SLC27A1Q6PCB7 646 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 OTOP2Q7RTS6 562 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 PLCZ1Q86YW0 608 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 ENTHD1Q8IYW4 607 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 EDEM1Q92611 657 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 PEX13Q92968 403 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 TBATAQ96M53 351 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 TRNT1Q96Q11 434 aaKnown RBP14.52□□□□□ -0.08
UBAP1-202ENST00000359544 CHCHD6Q9BRQ6 235 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 SIK2Q9H0K1 926 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 RANGRFQ9HD47 186 aaPredicted RBP14.52□□□□□ -0.08
UBAP1-202ENST00000359544 OSER1Q9NX31 292 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 DNMT3LQ9UJW3 386 aa14.52□□□□□ -0.08
UBAP1-202ENST00000359544 SHOXO15266 292 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 STX7O15400 261 aaKnown RBP14.52□□□□□ -0.09
UBAP1-202ENST00000359544 TLL1O43897 1013 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 ZNF780AO75290 641 aaPredicted RBP14.52□□□□□ -0.09
UBAP1-202ENST00000359544 IL6P05231 212 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 CD72P21854 359 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 HOXC13P31276 330 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 GRK5P34947 590 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 TUFMP49411 452 aaKnown RBP14.52□□□□□ -0.09
UBAP1-202ENST00000359544 RPP38P78345 283 aaKnown RBP14.52□□□□□ -0.09
UBAP1-202ENST00000359544 ACVR1Q04771 509 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 NPRL3Q12980 569 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 MBTPS1Q14703 1052 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 LAPTM4AQ15012 233 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 PAQR3Q6TCH7 311 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 ZNF767PQ75MW2 155 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 TAC4Q86UU9 113 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 SLC51BQ86UW2 128 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 SERINC5Q86VE9 423 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 CALHM3Q86XJ0 350 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 LIX1LQ8IVB5 337 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 MSRB3Q8IXL7 192 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 NKAPQ8N5F7 415 aaKnown RBP14.52□□□□□ -0.09
UBAP1-202ENST00000359544 ATG16L2Q8NAA4 619 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 BLOC1S5Q8TDH9 187 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 PPP3R2Q96LZ3 170 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 VPS35Q96QK1 796 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 CENPOQ9BU64 300 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 CATSPERZQ9NTU4 200 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 WDR70Q9NW82 654 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 SLC25A37Q9NYZ2 338 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 ITM2BQ9Y287 266 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 SCN5AQ14524 2016 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 ANKRD36A6QL64 1941 aa14.52□□□□□ -0.09
UBAP1-202ENST00000359544 ENPP3O14638 875 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 CD86P42081 329 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 RGS6P49758 472 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 RENBPP51606 427 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 MAD2L1Q13257 205 aaPredicted RBP14.51□□□□□ -0.09
UBAP1-202ENST00000359544 SLAMF1Q13291 335 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 RAB41Q5JT25 222 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 PIK3R6Q5UE93 754 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 ALKAL1Q6UXT8 129 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 CCDC71Q8IV32 467 aaPredicted RBP14.51□□□□□ -0.09
UBAP1-202ENST00000359544 METTL6Q8TCB7 284 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 CRELD1Q96HD1 420 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 COL21A1Q96P44 957 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 SLC22A4Q9H015 551 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 OLA1Q9NTK5 396 aaKnown RBP14.51□□□□□ -0.09
UBAP1-202ENST00000359544 SNX7Q9UNH6 387 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 GINS2Q9Y248 185 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 KLHL20Q9Y2M5 609 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 A0A096LPI6 279 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 A0A0U1RQS6 177 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 TEX51A0A1B0GUA7 166 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 NPEPPSL1A6NEC2 478 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 CCDC182A6NF36 153 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 CDC7O00311 574 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 BTN3A1O00481 513 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 LDB2O43679 373 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 POLR2CP19387 275 aaPredicted RBP14.51□□□□□ -0.09
UBAP1-202ENST00000359544 C21orf33P30042 268 aaPredicted RBP14.51□□□□□ -0.09
UBAP1-202ENST00000359544 HOXC8P31273 242 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 ERVPABLB-1P60509 514 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.51□□□□□ -0.09
UBAP1-202ENST00000359544 ITKQ08881 620 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 FAM174BQ3ZCQ3 159 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 TMCO2Q7Z6W1 182 aaPredicted RBP14.51□□□□□ -0.09
UBAP1-202ENST00000359544 CHCHD4Q8N4Q1 142 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 SNAPC3Q92966 411 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 MAP6Q96JE9 813 aa14.51□□□□□ -0.09
UBAP1-202ENST00000359544 SPATA17Q96L03 361 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms