RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-203ENST00000358528 PTCHD4Q6ZW05 846 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 CYP2U1Q7Z449 544 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 RIMKLAQ8IXN7 391 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 GPR65Q8IYL9 337 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 GLB1L3Q8NCI6 653 aaPredicted RBP6.4□□□□□ -1.39
CSDE1-203ENST00000358528 OR6Q1Q8NGQ2 317 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 LKAAEAR1Q8TD35 194 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 STARD8Q92502 1023 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 PSKH2Q96QS6 385 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 CITED4Q96RK1 184 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 MROQ9BYG7 248 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 CD244Q9BZW8 370 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 RAD18Q9NS91 495 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 SNTG1Q9NSN8 517 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 DCAF13Q9NV06 445 aaKnown RBP6.4□□□□□ -1.39
CSDE1-203ENST00000358528 VNN3Q9NY84 501 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 HCSTQ9UBK5 93 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 MALT1Q9UDY8 824 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 PCDHB1Q9Y5F3 818 aa6.4□□□□□ -1.39
CSDE1-203ENST00000358528 CENPXA8MT69 81 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 HAS3O00219 553 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF197O14709 1029 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 SNX4O95219 450 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 RPLP0P05388 317 aaKnown RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 FPR1P21462 350 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ATP6V1E1P36543 226 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 DAPP51397 102 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CCL23P55773 120 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 OR2B6P58173 313 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ABHD18Q0P651 414 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 DSC3Q14574 896 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 OXA1LQ15070 435 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TSTQ16762 297 aaKnown RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ZFP69Q49AA0 526 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 XKR7Q5GH72 579 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 NADSYN1Q6IA69 706 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 USP51Q70EK9 711 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 EIF3MQ7L2H7 374 aaKnown RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ZNF467Q7Z7K2 595 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 OR4K1Q8NGD4 311 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 GPR150Q8NGU9 434 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ADAMTS16Q8TE57 1224 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 PHF10Q8WUB8 498 aaKnown RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TMEM203Q969S6 136 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 MTERF3Q96E29 417 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 APIPQ96GX9 242 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 RDH12Q96NR8 316 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 KATNBL1Q9H079 304 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ZDHHC6Q9H6R6 413 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 NEK6Q9HC98 313 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TAS2R16Q9NYV7 291 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 SLC25A37Q9NYZ2 338 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ITGB1BP2Q9UKP3 347 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 FZD4Q9ULV1 537 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 PCDHB7Q9Y5E2 793 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 PRSS21Q9Y6M0 314 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TBKBP1A7MCY6 615 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TNFRSF10BO14763 440 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TPST2O60704 377 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 RFPL2O75678 378 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CCNDBP1O95273 360 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CSF2P04141 144 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CAPNS1P04632 268 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 FAM163BP0C2L3 166 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 KDELR2P33947 212 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 RECQLP46063 649 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 PPP5CP53041 499 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CDH4P55283 916 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 GABARAPL2P60520 117 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 PHC1P78364 1004 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 VLDLRP98155 873 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 PPP2R2BQ00005 443 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TIAL1Q01085 375 aaKnown RBP eCLIP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 NPRL3Q12980 569 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 NAE1Q13564 534 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 COL9A2Q14055 689 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 VEPH1Q14D04 833 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 DPY19L1Q2PZI1 675 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 SPATS1Q496A3 300 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 RUNDC3AQ59EK9 446 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CACTIN-AS1Q8N1I8 211 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 DPP10Q8N608 796 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 OR4A15Q8NGL6 344 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 VANGL1Q8TAA9 524 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ALOXE3Q9BYJ1 711 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 GPR62Q9BZJ7 368 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 ACOT13Q9NPJ3 140 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TIGARQ9NQ88 270 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 CTPS2Q9NRF8 586 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 HEBP1Q9NRV9 189 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 SLCO3A1Q9UIG8 710 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 BOLA1Q9Y3E2 137 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 DNMT3AQ9Y6K1 912 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-203ENST00000358528 BRWD3Q6RI45 1802 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 UPK1AO00322 258 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TLL1O43897 1013 aa6.39□□□□□ -1.39
CSDE1-203ENST00000358528 TMCC2O75069 709 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms