RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 NDUFA6P56556 154 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 SLC14A2Q15849 920 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 NTRK3Q16288 839 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 IGFN1Q86VF2 1251 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ATAD1Q8NBU5 361 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 IL21RQ9HBE5 538 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ASTN2O75129 1339 aaPredicted RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 A0A1B0GVI7 797 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 SH2D7A6NKC9 451 aaPredicted RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 A8MVJ9 347 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 AGPSO00116 658 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 SLC16A5O15375 505 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 LCKP06239 509 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 HOXB9P17482 250 aaPredicted RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 S100PP25815 95 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 KHKP50053 298 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 EPHA4P54764 986 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 PSPHP78330 225 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ARG2P78540 354 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ZDHHC17Q8IUH5 632 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ABRAQ8N0Z2 381 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 NLGN2Q8NFZ4 835 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 DQX1Q8TE96 717 aaKnown RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 VAT1Q99536 393 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 SMURF2Q9HAU4 748 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ZDHHC4Q9NPG8 344 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 SCO2O43819 266 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 GP1BBP13224 206 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 HK1P19367 917 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 PAX6P26367 422 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 SLC26A2P50443 739 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 FGL1Q08830 312 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 TARDBPQ13148 414 aaKnown RBP eCLIP9.55□□□□□ -0.88
CHD3-202ENST00000358181 ZNF773Q6PK81 442 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 KDM7AQ6ZMT4 941 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 GLYATL2Q8WU03 294 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 WDR18Q9BV38 432 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 SEMA4AQ9H3S1 761 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 PREX1Q8TCU6 1659 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 FADS2P1A8MWK0 482 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 PIP5K1BO14986 540 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 LSM1O15116 133 aaKnown RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 UGT2B11O75310 529 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 LPLP06858 475 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 NOGQ13253 232 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 NTRK2Q16620 822 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 CHRFAM7AQ494W8 412 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 CELF3Q5SZQ8 465 aaKnown RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 SWT1Q5T5J6 900 aaKnown RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 PSD4Q8NDX1 1056 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 TPPP3Q9BW30 176 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 KCNK4Q9NYG8 393 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 GPRC5BQ9NZH0 403 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 GRHPRQ9UBQ7 328 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ACAD8Q9UKU7 415 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 NEMP2A6NFY4 417 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 HACD1B0YJ81 288 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 J3QLW9 94 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 CRYZL1O95825 349 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ABOP16442 354 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ZNF19P17023 458 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 GOT1P17174 413 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 PTPN4P29074 926 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ZNF136P52737 540 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 GBX2P52951 348 aaPredicted RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 TIGD6Q17RP2 521 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 DCLRE1AQ6PJP8 1040 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 PRSS55Q6UWB4 352 aaPredicted RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 USP30Q70CQ3 517 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 USP50Q70EL3 339 aaPredicted RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 ARHGAP12Q8IWW6 846 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 TBC1D21Q8IYX1 336 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 ATOH1Q92858 354 aaPredicted RBP9.55□□□□□ -0.88
CHD3-202ENST00000358181 SLC6A7Q99884 636 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 IL22Q9GZX6 179 aa9.55□□□□□ -0.88
CHD3-202ENST00000358181 PRAMEF12O95522 483 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 TAF10Q12962 218 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 PARP6Q2NL67 630 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 CRTC2Q53ET0 693 aaPredicted RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 SLC39A4Q6P5W5 647 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ARPINQ7Z6K5 226 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 C12orf45Q8N5I9 185 aaPredicted RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 WNT8BQ93098 351 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SLC38A4Q969I6 547 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 FAM117AQ9C073 453 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SLC6A16Q9GZN6 736 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 A0A087WXM4 84 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 MT-ND1P03886 318 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 CFHP08603 1231 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 RAB10P61026 200 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 GAD2Q05329 585 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ZFP69Q49AA0 526 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 PAQR7Q86WK9 346 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SUCNR1Q9BXA5 334 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 C11orf49Q9H6J7 331 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SLC22A14Q9Y267 594 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 TIMM22Q9Y584 194 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 RAI2Q9Y5P3 530 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 C9JVG2 144 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 PROSCO94903 275 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms