RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 THAP1Q9NVV9 213 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 MOCS1Q9NZB8 636 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 PTPRSQ13332 1948 aa8.9□□□□□ -0.98
UPF2-202ENST00000357604 TMEM202A6NGA9 273 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 PCDH17O14917 1159 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 ANGPT2O15123 496 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 KITP10721 976 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 UROSP10746 265 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 GNGT1P63211 74 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 SPIN4Q56A73 249 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 SH2D4BQ5SQS7 431 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 RAB11FIP2Q7L804 512 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 OR4D9Q8NGE8 314 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 OR2W6PQ8NHA6 318 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 SLC13A3Q8WWT9 602 aa8.9□□□□□ -0.99
UPF2-202ENST00000357604 ZCWPW2A0A1B0GU75 182 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 ZNF821O75541 412 aaPredicted RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 C1orf105O95561 183 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 ALPPP05187 535 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 ZNF37AP17032 561 aaPredicted RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 CPN2P22792 545 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 GLIPR1L2Q4G1C9 344 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 ATAD3BQ5T9A4 648 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 GBP7Q8N8V2 638 aaPredicted RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 KCNE4Q8WWG9 221 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 USP7Q93009 1102 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 MIEF2Q96C03 454 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 CCDC74BQ96LY2 380 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 ULBP3Q9BZM4 244 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 XKR8Q9H6D3 395 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 MARCH4Q9P2E8 410 aaPredicted RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 NDUFAB1O14561 156 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 C1GALT1C1LP0DN25 315 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 UGT2B7P16662 529 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 IL10P22301 178 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 ARFIP2P53365 341 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 PCBP4P57723 403 aaKnown RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 HERVK_113P63132 956 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 CCL7P80098 99 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 XIAPP98170 497 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 ART3Q13508 389 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 SLC9A5Q14940 896 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 GKAP1Q5VSY0 366 aaPredicted RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 NXPE4Q6UWF7 544 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 CCDC121Q6ZUS5 278 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 TMEM132CQ8N3T6 1108 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 PRSS33Q8NF86 280 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 OR5AR1Q8NGP9 310 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 ERVK-6Q9BXR3 956 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 C14orf105Q9NVL8 296 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 CORO2BQ9UQ03 480 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 AP3M1Q9Y2T2 418 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 L3MBTL1Q9Y468 752 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 BHMG1C9JSJ3 638 aaPredicted RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 MAP2K7O14733 419 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 CHUKO15111 745 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 UGDHO60701 494 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 SLCO2B1O94956 709 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 CDH1P12830 882 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 UQCRBP14927 111 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 CD1DP15813 335 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 RPL14P50914 215 aaKnown RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 TBPL1P62380 186 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 CLCQ05315 142 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 FASTKD3Q14CZ7 662 aaKnown RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 PPM1JQ5JR12 505 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 CTSL3PQ5NE16 218 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 DENND5AQ6IQ26 1287 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 FBXO15Q8NCQ5 510 aaPredicted RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 PROKR1Q8TCW9 393 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 BAG5Q9UL15 447 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 PRSS21Q9Y6M0 314 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 RNF215Q9Y6U7 377 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 SLC30A4O14863 429 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 EBLN1P0CF75 366 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 HPGDP15428 266 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 PIK3R1P27986 724 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 GABREP78334 506 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 GPR18Q14330 331 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 C3orf38Q5JPI3 329 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 DGAT2Q96PD7 388 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 DPY30Q9C005 99 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 GPN2Q9H9Y4 310 aaPredicted RBP8.89□□□□□ -0.99
UPF2-202ENST00000357604 CD320Q9NPF0 282 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 STOML1Q9UBI4 398 aa8.89□□□□□ -0.99
UPF2-202ENST00000357604 AZIN1O14977 448 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 FAM153BP0C7A2 387 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 HSD3B1P14060 373 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 HSD3B2P26439 372 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 TAS2R38P59533 333 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 NHLH1Q02575 133 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 FAM153CQ494X1 144 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 GARNL3Q5VVW2 1013 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 LAYNQ6UX15 382 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 CLYBLQ8N0X4 340 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 FAM181AQ8N9Y4 354 aa8.88□□□□□ -0.99
UPF2-202ENST00000357604 SNIP1Q8TAD8 396 aaKnown RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 MTFMTQ96DP5 389 aaKnown RBP8.88□□□□□ -0.99
UPF2-202ENST00000357604 NOL11Q9H8H0 719 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms