RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 GDI2P50395 445 aaKnown RBP12.9□□□□□ -0.34
SCN8A-202ENST00000355133 CCNHP51946 323 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-202ENST00000355133 AP3S2P59780 193 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 UAP1L1Q3KQV9 507 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 ZNF776Q68DI1 518 aaPredicted RBP12.9□□□□□ -0.34
SCN8A-202ENST00000355133 ZDHHC24Q6UX98 284 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 CAMKVQ8NCB2 501 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 CMTM7Q96FZ5 175 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 CRELD1Q96HD1 420 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 ZFP3Q96NJ6 502 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 LRRC3Q9BY71 257 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 GALPQ9UBC7 116 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 LDB2O43679 373 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 BCHEP06276 602 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 S100A9P06702 114 aaKnown RBP12.9□□□□□ -0.34
SCN8A-202ENST00000355133 HOXB2P14652 356 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 GDF5P43026 501 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 XKP51811 444 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 ENPP2Q13822 863 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 ADGRE1Q14246 886 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 KLHL22Q53GT1 634 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 TMEM164Q5U3C3 297 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 FRG2Q64ET8 278 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 LRRC70Q7Z2Q7 622 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 SUN3Q8TAQ9 357 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 FRG2BQ96QU4 278 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 CXorf21Q9HAI6 301 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 AMBNQ9NP70 447 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 SERINC1Q9NRX5 453 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 GDAP2Q9NXN4 497 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 SPATA7Q9P0W8 599 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 P2RX2Q9UBL9 471 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-202ENST00000355133 A0A1W2PQ45 241 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-202ENST00000355133 A0A1W2PQY0 241 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 CLIC1O00299 241 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 PGLSO95336 258 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 DGKQP52824 942 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 CHAF1BQ13112 559 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SH3D19Q5HYK7 790 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SLC29A4Q7RTT9 530 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SLC30A8Q8IWU4 369 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF527Q8NB42 609 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 DCAKDQ8WVC6 231 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 RIT1Q92963 219 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 KXD1Q9BQD3 176 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 LGR4Q9BXB1 951 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SMOC2Q9H3U7 446 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 USP29Q9HBJ7 922 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 CENPMQ9NSP4 180 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 FGF18O76093 207 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SERPINA3P01011 423 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF20P17024 532 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SLC6A9P48067 706 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 DCAF12L1Q5VU92 463 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 P4HA3Q7Z4N8 544 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 ARMC10Q8N2F6 343 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 PROKR2Q8NFJ6 384 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 NDC1Q9BTX1 674 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 Q9Y3F1 56 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 ANKRD66B4E2M5 251 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 C8orf89P0DMQ9 161 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 HCAR3P49019 387 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 IQCCQ4KMZ1 466 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 EOGTQ5NDL2 527 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 CLDN19Q8N6F1 224 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 CMASQ8NFW8 434 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-202ENST00000355133 FLRT1Q9NZU1 646 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 INSL5Q9Y5Q6 135 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 PMF1-BGLAPU3KQ54 211 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 B4GALT2O60909 372 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 GATBO75879 557 aaKnown RBP12.89□□□□□ -0.35
SCN8A-202ENST00000355133 CYP11A1P05108 521 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 LINGO3P0C6S8 592 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SCN1BQ07699 218 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 ZFP69Q49AA0 526 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SPIN4Q56A73 249 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 MS4A13Q5J8X5 152 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 RBM20Q5T481 1227 aaKnown RBP12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SLC9A4Q6AI14 798 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 DNAJB8Q8NHS0 232 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 GORASP1Q9BQQ3 440 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 TRNAU1APQ9NX07 287 aaKnown RBP12.89□□□□□ -0.35
SCN8A-202ENST00000355133 COMMD3Q9UBI1 195 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 FZD9O00144 591 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 DNM1LO00429 736 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 TOR1BO14657 336 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 RPLP0P05388 317 aaKnown RBP12.89□□□□□ -0.35
SCN8A-202ENST00000355133 PCSK2P16519 638 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 RAB8AP61006 207 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 RASGEF1BQ0VAM2 473 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF627Q7L945 461 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SLC35F5Q8WV83 523 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 TFGQ92734 400 aaPredicted RBP12.89□□□□□ -0.35
SCN8A-202ENST00000355133 PKP4Q99569 1192 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 B3GNT4Q9C0J1 378 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 SMURF2Q9HAU4 748 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 ZNF221Q9UK13 617 aa12.89□□□□□ -0.35
SCN8A-202ENST00000355133 LOC730098B7Z3J9 87 aa12.88□□□□□ -0.35
SCN8A-202ENST00000355133 AGPSO00116 658 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms