RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 LIMD1Q9UGP4 676 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 ENPP5Q9UJA9 477 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 B3GNT3Q9Y2A9 372 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 CIB4A0PJX0 185 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 PRORSD1PA6NEY8 169 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 NPIPB15A6NHN6 443 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-203ENST00000354674 DLGAP1O14490 977 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ACOT8O14734 319 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 TPP1O14773 563 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 FOSL2P15408 326 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 NAGAP17050 411 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 CD40LGP29965 261 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 DSTNP60981 165 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ILF2Q12905 390 aaKnown RBP9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ELAVL3Q14576 367 aaKnown RBP9.83□□□□□ -0.84
SYNE1-203ENST00000354674 HERC3Q15034 1050 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 UGP2Q16851 508 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 TYSND1Q2T9J0 566 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 FSTL4Q6MZW2 842 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 TXNDC11Q6PKC3 985 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 CRTC1Q6UUV9 634 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ABRAXAS1Q6UWZ7 409 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF438Q7Z4V0 828 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 CDH24Q86UP0 819 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 AMIGO1Q86WK6 493 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 DENND6AQ8IWF6 608 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 PHC2Q8IXK0 858 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 CBARPQ8N350 705 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-203ENST00000354674 FBXL6Q8N531 539 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 OR7A2PQ8NGA2 310 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 LRRC20Q8TCA0 184 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ITCHQ96J02 903 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 GPR22Q99680 433 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 RHOJQ9H4E5 214 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 POLR3BQ9NW08 1133 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-203ENST00000354674 FBXO5Q9UKT4 447 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 TESMINQ9Y4I5 508 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ARPC4-TTLL3A0A0A6YYG9 625 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 RGSL1A5PLK6 1076 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ANTXRLA6NF34 631 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 B8ZZF3 427 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 AKR7A2O43488 359 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 BNIP3LO60238 219 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 GPC4O75487 556 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 DNTTP04053 509 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ALDOAP04075 364 aaKnown RBP9.83□□□□□ -0.84
SYNE1-203ENST00000354674 PRNPP04156 253 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 FCER2P06734 321 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 C7P10643 843 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 TIMP2P16035 220 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 OGNP20774 298 aaKnown RBP9.83□□□□□ -0.84
SYNE1-203ENST00000354674 S100A5P33763 92 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 GLRBP48167 497 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 CTAG1AP78358 180 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 RHAGQ02094 409 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 CDK10Q15131 360 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 TMEM196Q5HYL7 178 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF470Q6ECI4 717 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 AFTPHQ6ULP2 937 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 USP45Q70EL2 814 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 EPHX4Q8IUS5 362 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 NLGN4XQ8N0W4 816 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 EID3Q8N140 333 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 STK40Q8N2I9 435 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF366Q8N895 744 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 OR13F1Q8NGS4 319 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 OR4L1Q8NH43 312 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ACMSDQ8TDX5 336 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 MSANTD3Q96H12 275 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ZFYVE1Q9HBF4 777 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ATPIF1Q9UII2 106 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 SARDHQ9UL12 918 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 BAG5Q9UL15 447 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 VPS4AQ9UN37 437 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 HCN4Q9Y3Q4 1203 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 SHISA7A6NL88 538 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 SMLR1H3BR10 107 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 CCL22O00626 93 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 GAPDHSO14556 408 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-203ENST00000354674 S1PR4O95977 384 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 C8BP07358 591 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 HLA-EP13747 358 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF250P15622 560 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 IL32P24001 234 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 PSME3P61289 254 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 CTBP1Q13363 440 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 FAM109AQ8N4B1 249 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 FAR1Q8WVX9 515 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 ACOX2Q99424 681 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 UQCC2Q9BRT2 126 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 AKIP1Q9NQ31 210 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 TIGARQ9NQ88 270 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 PRSS16Q9NQE7 514 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 SLC2A4RGQ9NR83 387 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 EVA1BQ9NVM1 165 aa9.83□□□□□ -0.84
SYNE1-203ENST00000354674 MARCH4Q9P2E8 410 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-203ENST00000354674 TCF20Q9UGU0 1960 aaKnown RBP9.82□□□□□ -0.84
SYNE1-203ENST00000354674 A0A0U1RQS6 177 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 OR51F1A6NGY5 319 aa9.82□□□□□ -0.84
SYNE1-203ENST00000354674 LOC730098B7Z3J9 87 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms