RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 SMPDL3AQ92484 453 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 HAUS8Q9BT25 410 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 MIR1-1HGQ9H1L0 117 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 LRTM1Q9HBL6 345 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 WASH6PQ9NQA3 447 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 TAC3Q9UHF0 121 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 POLR3HQ9Y535 204 aaPredicted RBP19.84■□□□□ 0.77
TRIM4-202ENST00000354241 COLEC10Q9Y6Z7 277 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 TRBV23OR9-2A0A075B6M9 112 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 AIM2O14862 343 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 GSC2O15499 205 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 SEC22BO75396 215 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 C1GALT1C1LP0DN25 315 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 CASP2P42575 452 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 SLC25A3Q00325 362 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 DMWDQ09019 674 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 DDX39BQ13838 428 aaKnown RBP19.84■□□□□ 0.77
TRIM4-202ENST00000354241 RFTN2Q52LD8 501 aaPredicted RBP19.84■□□□□ 0.77
TRIM4-202ENST00000354241 ATG9BQ674R7 924 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 CWF19L1Q69YN2 538 aaKnown RBP19.84■□□□□ 0.77
TRIM4-202ENST00000354241 NXPE4Q6UWF7 544 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 LAYNQ6UX15 382 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 SLC36A4Q6YBV0 504 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 RNF175Q8N4F7 328 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 UTP4Q969X6 686 aaKnown RBP19.84■□□□□ 0.77
TRIM4-202ENST00000354241 MCUR1Q96AQ8 359 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 RCN3Q96D15 328 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 HSPA12BQ96MM6 686 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 C1orf21Q9H246 121 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 SDR39U1Q9NRG7 319 aaPredicted RBP19.84■□□□□ 0.77
TRIM4-202ENST00000354241 KLF15Q9UIH9 416 aa19.84■□□□□ 0.77
TRIM4-202ENST00000354241 H0YIV9 168 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 PCNAP12004 261 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 CDH1P12830 882 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 BCKDHBP21953 392 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 PKLRP30613 574 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 RAB28P51157 221 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 IRX1P78414 480 aaPredicted RBP19.83■□□□□ 0.77
TRIM4-202ENST00000354241 SLBPQ14493 270 aaKnown RBP eCLIP19.83■□□□□ 0.77
TRIM4-202ENST00000354241 DNAL1Q4LDG9 190 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 IL23RQ5VWK5 629 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 PARGQ86W56 976 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 LINC01555Q8NAE3 123 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 WDR20Q8TBZ3 569 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 NECAB3Q96P71 396 aaPredicted RBP19.83■□□□□ 0.77
TRIM4-202ENST00000354241 RAB11FIP5Q9BXF6 653 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 NOP53Q9NZM5 478 aaKnown RBP19.83■□□□□ 0.77
TRIM4-202ENST00000354241 PCOLCE2Q9UKZ9 415 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 PCDHGA11Q9Y5H2 935 aa19.83■□□□□ 0.77
TRIM4-202ENST00000354241 TDRD6O60522 2096 aaKnown RBP19.83■□□□□ 0.76
TRIM4-202ENST00000354241 WNT1P04628 370 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 SNRPB2P08579 225 aaKnown RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 PSMB5P28074 263 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 CD38P28907 300 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 CPOXP36551 454 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 ACADVLP49748 655 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 NUDT2P50583 147 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 E2F2Q14209 437 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 PAGE2BQ5JRK9 111 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 MED27Q6P2C8 311 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 C17orf64Q86WR6 236 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 MFSD2AQ8NA29 543 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 CXorf40BQ96DE9 158 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 WDR34Q96EX3 536 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 SLC45A3Q96JT2 553 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 MTERF1Q99551 399 aaKnown RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 EFCAB11Q9BUY7 163 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 GSDMCQ9BYG8 508 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 BRINP2Q9C0B6 783 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 EHD1Q9H4M9 534 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 SLC40A1Q9NP59 571 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 SPATA6Q9NWH7 488 aaPredicted RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 C1orf109Q9NX04 203 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 DLGAP2Q9P1A6 1054 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 ICKQ9UPZ9 632 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 ABCA7Q8IZY2 2146 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 A0A1W2PPV9 198 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 KDM1AO60341 852 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 F3P13726 295 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 CTSEP14091 401 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 MEF2AQ02078 507 aaPredicted RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 MAD2L1Q13257 205 aaPredicted RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 HIST2H2ACQ16777 129 aaPredicted RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 PDCD4Q53EL6 469 aaKnown RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 HIST2H2AA3Q6FI13 130 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 TSSK4Q6SA08 328 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 ZFAND4Q86XD8 727 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 DCP2Q8IU60 420 aaKnown RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 FUNDC1Q8IVP5 155 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 TMEFF1Q8IYR6 380 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 OR7G3Q8NG95 312 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 OR2L8Q8NGY9 312 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 GPBAR1Q8TDU6 330 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 JPH3Q8WXH2 748 aaPredicted RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 PCBD2Q9H0N5 130 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 KIR3DX1Q9H7L2 352 aa19.82■□□□□ 0.76
TRIM4-202ENST00000354241 GEMIN8Q9NWZ8 242 aaKnown RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 ZNF624Q9P2J8 865 aaPredicted RBP19.82■□□□□ 0.76
TRIM4-202ENST00000354241 EIF3LQ9Y262 564 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms