RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 PSD2Q9BQI7 771 aa23.84■■□□□ 1.41
CPNE1-202ENST00000352393 CCNB1IP1Q9NPC3 277 aa23.84■■□□□ 1.41
CPNE1-202ENST00000352393 CASP8AP2Q9UKL3 1982 aa23.84■■□□□ 1.41
CPNE1-202ENST00000352393 MICAL3Q7RTP6 2002 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-202ENST00000352393 MYO1GB0I1T2 1018 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 SCAMP3O14828 347 aaKnown RBP23.83■■□□□ 1.41
CPNE1-202ENST00000352393 SMAD6O43541 496 aaKnown RBP23.83■■□□□ 1.41
CPNE1-202ENST00000352393 RGS10O43665 173 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 LRATO95237 230 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 FABP3P05413 133 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 PCSK2P16519 638 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 PSMB9P28065 219 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 RXRGP48443 463 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 LSM3P62310 102 aaKnown RBP23.83■■□□□ 1.41
CPNE1-202ENST00000352393 VLDLRP98155 873 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 IL1RL1Q01638 556 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 VMACQ2NL98 169 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 CCDC81Q6ZN84 652 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 GPR155Q7Z3F1 870 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 EGLN2Q96KS0 407 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 ACOT13Q9NPJ3 140 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 KLHL42Q9P2K6 505 aa23.83■■□□□ 1.41
CPNE1-202ENST00000352393 EVPLLA8MZ36 301 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 hCG_2039718K7EN88 272 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 SEC24AO95486 1093 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 FADS2O95864 444 aaKnown RBP23.83■■□□□ 1.4
CPNE1-202ENST00000352393 TGM1P22735 817 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 GKP32189 559 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 OR1D2P34982 312 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 TRPC1P48995 793 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 ST13P50502 369 aaKnown RBP23.83■■□□□ 1.4
CPNE1-202ENST00000352393 INAQ16352 499 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 SMN1Q16637 294 aaKnown RBP23.83■■□□□ 1.4
CPNE1-202ENST00000352393 ZCCHC8Q6NZY4 707 aaKnown RBP23.83■■□□□ 1.4
CPNE1-202ENST00000352393 NCCRP1Q6ZVX7 275 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-202ENST00000352393 PRSS48Q7RTY5 328 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 L3MBTL4Q8NA19 623 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 SIGLEC11Q96RL6 698 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 PITX2Q99697 317 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 PDP1Q9P0J1 537 aaPredicted RBP23.83■■□□□ 1.4
CPNE1-202ENST00000352393 RPS6KA6Q9UK32 745 aa23.83■■□□□ 1.4
CPNE1-202ENST00000352393 GFRA2O00451 464 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 SOCS5O75159 536 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 ALOX5P09917 674 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 KRT20P35900 424 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 NSG1P42857 185 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 KIR3DL1P43629 444 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 SLC6A12P48065 614 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 NCS1P62166 190 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 HIST2H2ACQ16777 129 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-202ENST00000352393 DUOXA1Q1HG43 343 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 TMEM236Q5W0B7 351 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 ADCK1Q86TW2 530 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 SNX29P2Q8IUI4 249 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 FCRL1Q96LA6 429 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 TMEM175Q9BSA9 504 aa23.82■■□□□ 1.4
CPNE1-202ENST00000352393 E9PQ18 207 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 FAM20BO75063 409 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 DIRAS1O95057 198 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 KCNK5O95279 499 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 LATS1O95835 1130 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 AMD1P17707 334 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 EPHA2P29317 976 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 HALP42357 657 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 CD300CQ08708 224 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 PLD1Q13393 1074 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 CDH18Q13634 790 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 DGCR6Q14129 220 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 TSPYL5Q86VY4 417 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-202ENST00000352393 PTOV1Q86YD1 416 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 CCDC71Q8IV32 467 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-202ENST00000352393 SLC22A15Q8IZD6 547 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 TCAIMQ8N3R3 496 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 ZNF540Q8NDQ6 660 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 GPR26Q8NDV2 337 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 APOLD1Q96LR9 279 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 EIF3FO00303 357 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-202ENST00000352393 CCR7P32248 378 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 TGFBR2P37173 567 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 ITGA1P56199 1179 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 KIAA1614Q5VZ46 1190 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 FAHD1Q6P587 224 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 ERICH5Q6P6B1 374 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 UBE2R2Q712K3 238 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-202ENST00000352393 VTCN1Q7Z7D3 282 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 GALNT10Q86SR1 603 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 TSPAN33Q86UF1 283 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 HORMAD1Q86X24 394 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 ZSWIM9Q86XI8 627 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 APCDD1Q8J025 514 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 HSH2DQ96JZ2 352 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 MYOCQ99972 504 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 REXO4Q9GZR2 422 aaKnown RBP23.81■■□□□ 1.4
CPNE1-202ENST00000352393 WDR37Q9Y2I8 494 aa23.81■■□□□ 1.4
CPNE1-202ENST00000352393 SERTM1A2A2V5 107 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 TTC34A8MYJ7 566 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 CLIC1O00299 241 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 ENGP17813 658 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 GPX2P18283 190 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms