RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 A0A1W2PQ67 120 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ANKRD66B4E2M5 251 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ATG13O75143 517 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 AVILO75366 819 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 WFS1O76024 890 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 OR2C1O95371 312 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ONECUT2O95948 504 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 UGT2B4P06133 528 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 TIMP2P16035 220 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PSMA4P25789 261 aaKnown RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 CLCNKAP51800 687 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 RPL26P61254 145 aaKnown RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 RPS14P62263 151 aaKnown RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 VSNL1P62760 191 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 CDH17Q12864 832 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 MALLQ13021 153 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 GALNT3Q14435 633 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 NAPEPLDQ6IQ20 393 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 OGFOD3Q6PK18 319 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PPP1R21Q6ZMI0 780 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 MMAAQ8IVH4 418 aaKnown RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 KRT222Q8N1A0 295 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 SLC25A41Q8N5S1 370 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 GBP7Q8N8V2 638 aaPredicted RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 OR56A3Q8NH54 315 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PIP4K2CQ8TBX8 421 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 HMGB4Q8WW32 186 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ATOH1Q92858 354 aaPredicted RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ARRDC3Q96B67 414 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 PWWP2AQ96N64 755 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 TUBA1CQ9BQE3 449 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 APOL2Q9BQE5 337 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 FSD1LQ9BXM9 530 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 ADGRE3Q9BY15 652 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 GRIP2Q9C0E4 1043 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 WDR26Q9H7D7 661 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 EXTL2Q9UBQ6 330 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 NFU1Q9UMS0 254 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 RPL26L1Q9UNX3 145 aaKnown RBP5.04□□□□□ -1.6
VCAM1-202ENST00000347652 CKAP5Q14008 2032 aa5.04□□□□□ -1.6
VCAM1-202ENST00000347652 WDFY3Q8IZQ1 3526 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 TCRBV21S2A2A0A5A6 115 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 DCDC2BA2VCK2 349 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 ISM1B1AKI9 464 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 E7ESA3 106 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 C1QTNF3-AMACRE9PGA6 284 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 NVLO15381 856 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 RNASEH1O60930 286 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PNPP00491 289 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 IL1BP01584 269 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 FGF1P05230 155 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 TROVE2P10155 538 aaKnown RBP eCLIP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 MCM3P25205 808 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 ITGB7P26010 798 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 SLC8A1P32418 973 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 CHRNA4P43681 627 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 NPY2RP49146 381 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 CCR3P51677 355 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 POLR2LP62875 67 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 YBX1P67809 324 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 RAPSNQ13702 412 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 SEC23BQ15437 767 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 CST6Q15828 149 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 BAK1Q16611 211 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 ZSCAN26Q16670 478 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 GKAP1Q5VSY0 366 aaPredicted RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 FAM46CQ5VWP2 391 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 ZNF776Q68DI1 518 aaPredicted RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 BRAT1Q6PJG6 821 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PTCHD4Q6ZW05 846 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PRICKLE2Q7Z3G6 844 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PROSER1Q86XN7 944 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 GATAD2AQ86YP4 633 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PDCD6IPQ8WUM4 868 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 ELP4Q96EB1 424 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 ZC3H10Q96K80 434 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 SIGLEC10Q96LC7 697 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 RUFY1Q96T51 708 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 TACO1Q9BSH4 297 aaKnown RBP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 HDAC8Q9BY41 377 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 TLK1Q9UKI8 766 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 SOX13Q9UN79 622 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 RCE1Q9Y256 329 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 C15orf41Q9Y2V0 281 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 OTOGLQ3ZCN5 2332 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 A0A0J9YYE9 177 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 XKRY2A2RUG3 117 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 MID1O15344 667 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 EIF3HO15372 352 aaKnown RBP eCLIP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 CYTIPO60759 359 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 DNAJB6O75190 326 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 TRBC1P01850 177 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 ALPPP05187 535 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 ALPPL2P10696 532 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 GABRG2P18507 467 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 CYP2A7P20853 494 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 PTBP1P26599 531 aaKnown RBP eCLIP5.03□□□□□ -1.6
VCAM1-202ENST00000347652 GRK3P35626 688 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 STAT5AP42229 794 aa5.03□□□□□ -1.6
VCAM1-202ENST00000347652 MAGEA9P43362 315 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms