RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FUCA1P04066 466 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 CKMP06732 381 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 EBLN1P0CF75 366 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 EPB42P16452 691 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 DGKAP23743 735 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 EEF1B2P24534 225 aaKnown RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 AQP1P29972 269 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 DGKEP52429 567 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 MC1RQ01726 317 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 TAGLNQ01995 201 aaKnown RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 MEF2AQ02078 507 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 EMX1Q04741 257 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 ABRQ12979 859 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 GAB1Q13480 694 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 GRIN2CQ14957 1233 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 SPOUT1Q5T280 376 aaKnown RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 WDR53Q7Z5U6 358 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 B3GNT8Q7Z7M8 397 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 MICU2Q8IYU8 434 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 GOLM1Q8NBJ4 401 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 PDZD8Q8NEN9 1154 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 APH1BQ8WW43 257 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 SELENOMQ8WWX9 145 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 RPL3LQ92901 407 aaKnown RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 UCN3Q969E3 161 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 WFDC6Q9BQY6 131 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 BDH2Q9BUT1 245 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 REXO4Q9GZR2 422 aaKnown RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 RLIMQ9NVW2 624 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 C1orf109Q9NX04 203 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 TUBA8Q9NY65 449 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 SELENONQ9NZV5 590 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 DOLKQ9UPQ8 538 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 PCDHB1Q9Y5F3 818 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 ATG2BQ96BY7 2078 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 OTOL1A6NHN0 477 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 ARHGEF33A8MVX0 844 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 GFYI3L273 518 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 SPINT1O43278 529 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 BCAS1O75363 584 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 OPRD1P41143 372 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 GSSP48637 474 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 SPINT3P49223 89 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 CLDN8P56748 225 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 CDK5R2Q13319 367 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 TMED1Q13445 227 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 DCTN2Q13561 401 aaKnown RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 TAF12Q16514 161 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 SOWAHCQ53LP3 525 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 NOXRED1Q6NXP6 359 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF773Q6PK81 442 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 HTR3DQ70Z44 454 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 HJURPQ8NCD3 748 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 PSD4Q8NDX1 1056 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 FIBINQ8TAL6 211 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 NDNFQ8TB73 568 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 WDR20Q8TBZ3 569 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 FNDC8Q8TC99 324 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 UBTD2Q8WUN7 234 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 SKA2Q8WVK7 121 aaPredicted RBP5.86□□□□□ -1.47
CLCN3-201ENST00000347613 FAR1Q8WVX9 515 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 FAM162AQ96A26 154 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 HTATIP2Q9BUP3 242 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 TRIM15Q9C019 465 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 SLC32A1Q9H598 525 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 SUV39H2Q9H5I1 410 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 RNF167Q9H6Y7 350 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 CD320Q9NPF0 282 aa5.86□□□□□ -1.47
CLCN3-201ENST00000347613 GABRR3A8MPY1 467 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 SLC1A7O00341 560 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 PITPNM1O00562 1244 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 GIPC1O14908 333 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 RGS14O43566 566 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ALBP02768 609 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CA8P35219 290 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 BDKRB1P46663 353 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ERVFC1P60507 584 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 AP1S1P61966 158 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CHRNB3Q05901 458 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 SMARCB1Q12824 385 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ELAVL2Q12926 359 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 DDX39BQ13838 428 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ADPRMQ3LIE5 342 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 FAM98BQ52LJ0 330 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF691Q5VV52 312 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CERS6Q6ZMG9 384 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 Q6ZNX1 250 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 C12orf40Q86WS4 652 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ZZZ3Q8IYH5 903 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TCEAL8Q8IYN2 117 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 ALDH16A1Q8IZ83 802 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 NLGN4XQ8N0W4 816 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 RASGEF1AQ8N9B8 481 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 PPP3R2Q96LZ3 170 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 SORBS1Q9BX66 1292 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 CHST8Q9H2A9 424 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TIMMDC1Q9NPL8 285 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 DNAAF2Q9NVR5 837 aaKnown RBP5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TRPS1Q9UHF7 1281 aa5.85□□□□□ -1.47
CLCN3-201ENST00000347613 TMCO1Q9UM00 188 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms