RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ISG20Q96AZ6 181 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 PDE7BQ9NP56 450 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 TMED5Q9Y3A6 229 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 ATP6V1G2O95670 118 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 TOP3BO95985 862 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 SUSD1Q6UWL2 747 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 FAM92BQ6ZTR7 304 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 METTL27Q8N6F8 245 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 PNPT1Q8TCS8 783 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 LINC01599Q8WXQ3 324 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 ZNF446Q9NWS9 450 aa15.97■□□□□ 0.15
SMARCA4-201ENST00000344626 A8MT66 165 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 PSMG1O95456 288 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 TSPAN19P0C672 248 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 PRR11Q96HE9 360 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 SIGLEC10Q96LC7 697 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 HERPUD2Q9BSE4 406 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 ACTL7AQ9Y615 435 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 NUMA1Q14980 2115 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 A0A1W2PRB8 838 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 COQ9O75208 318 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 CER1O95813 267 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 F11P03951 625 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 CHRM1P11229 460 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 RAB8AP61006 207 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 RAB41Q5JT25 222 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 COLEC12Q5KU26 742 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 OXR1Q8N573 874 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 ROPN1LQ96C74 230 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 DEPDC7Q96QD5 511 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 SH3GL2Q99962 352 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 ADAP2Q9NPF8 381 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 PRORSD1PA6NEY8 169 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 EDIL3O43854 480 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 OR6B1O95007 311 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 F7P08709 466 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 PTSQ03393 145 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 LRRC74BQ6ZQY2 392 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 CADM2Q8N3J6 435 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 MAGEE2Q8TD90 523 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 GPR151Q8TDV0 419 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 ZHX1-C8orf76Q96EF9 292 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 PLEKHG4BQ96PX9 1271 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 USP3Q9Y6I4 520 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 OR6C74A6NCV1 312 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 PSMD11O00231 422 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 EBLN1P0CF75 366 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 PLGLB1Q02325 96 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 HHEXQ03014 270 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 ELOAQ14241 798 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 PTCHD3Q3KNS1 767 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 SCRN2Q96FV2 425 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 ASB16Q96NS5 453 aa15.96■□□□□ 0.15
SMARCA4-201ENST00000344626 DRGXA6NNA5 263 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 CDC7O00311 574 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 ABLIM3O94929 683 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 ALOX5P09917 674 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 PSMB9P28065 219 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 HLA-FP30511 346 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 RAB6CQ53S08 254 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 RBM20Q5T481 1227 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 YTHDF3Q7Z739 585 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 UBALD2Q8IYN6 164 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 TBC1D21Q8IYX1 336 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 TLCD1Q96CP7 247 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 CFHR5Q9BXR6 569 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 RACGAP1Q9H0H5 632 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 RAB6CQ9H0N0 254 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 STX16-NPEPL1H3BU86 382 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 STX16O14662 325 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 SLC22A2O15244 555 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 HMGCLP35914 325 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 TALDO1P37837 337 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 ACTR3P61158 418 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 ABATP80404 500 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 HKDC1Q2TB90 917 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 VANGL1Q8TAA9 524 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 PYDC1Q8WXC3 89 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 SLC17A6Q9P2U8 582 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 CNOT1A5YKK6 2376 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 SIPA1L3O60292 1781 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 CD247P20963 164 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 KLF1Q13351 362 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 C16orf72Q14CZ0 275 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 GLYATQ6IB77 296 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 ZNF730Q6ZMV8 503 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 OR10H5Q8NGA6 315 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 ZNF229Q9UJW7 825 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 GMPPBQ9Y5P6 360 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 CXorf49A8MYA2 514 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 MATN2O00339 956 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 IFNW1P05000 195 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 SPINT3P49223 89 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 FNTBP49356 437 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 TIFABQ6ZNK6 161 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 PPP1R14AQ96A00 147 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 DCBLD2Q96PD2 775 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 C12orf65Q9H3J6 166 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 IKZF3Q9UKT9 509 aa15.95■□□□□ 0.14
SMARCA4-201ENST00000344626 BRWD1Q9NSI6 2320 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms