RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 PDZD7Q9H5P4 517 aa11.9□□□□□ -0.51
SEMA6A-202ENST00000343348 NANSQ9NR45 359 aa11.9□□□□□ -0.51
SEMA6A-202ENST00000343348 RDH8Q9NYR8 311 aa11.9□□□□□ -0.51
SEMA6A-202ENST00000343348 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.51
SEMA6A-202ENST00000343348 SLC22A1O15245 554 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 CLIC3O95833 236 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 OGNP20774 298 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 ADAM15Q13444 863 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 OLIG2Q13516 323 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 OR4F3Q6IEY1 312 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 ABHD15Q6UXT9 468 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 GALNT12Q8IXK2 581 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 CPA6Q8N4T0 437 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 NKD2Q969F2 451 aaPredicted RBP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 TSPAN18Q96SJ8 248 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 RHCGQ9UBD6 479 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 GNG8Q9UK08 70 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 TRIM64CA6NLI5 447 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 PPM1BO75688 479 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 KELP23276 732 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 RASGEF1BQ0VAM2 473 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 ANKRD26P1Q6NSI1 321 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 SSX6Q7RTT6 188 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 GJD3Q8N144 294 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 JAGN1Q8N5M9 183 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 CNDP2Q96KP4 475 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 CCDC86Q9H6F5 360 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 E7EQ34 232 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 PRKD1Q15139 912 aaPredicted RBP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 AMZ1Q400G9 498 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 VGLL2Q8N8G2 317 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 GATAD2BQ8WXI9 593 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 FCGR1BQ92637 280 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 LRRC3Q9BY71 257 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 MYBPHLA2RUH7 354 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 OR6C75A6NL08 312 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 RHPN2P1A8MT19 583 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 PRPS2P11908 318 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 PDCD4Q53EL6 469 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 PAQR3Q6TCH7 311 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 CERS5Q8N5B7 392 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 GALNT6Q8NCL4 622 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 ZBED6CLQ96FA7 236 aaPredicted RBP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 TMEM74Q96NL1 305 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 FUZQ9BT04 418 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 DUS2Q9NX74 493 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 CLIC1O00299 241 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 HMGB3O15347 200 aaKnown RBP11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 MAP2K5Q13163 448 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 BTBD16Q32M84 506 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 CERS6Q6ZMG9 384 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 GPC2Q8N158 579 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 AQP11Q8NBQ7 271 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 PPTC7Q8NI37 304 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 PCDH19Q8TAB3 1148 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 SLC38A3Q99624 504 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 ITPAQ9BY32 194 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 OR2AG1Q9H205 316 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 DPAGT1Q9H3H5 408 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 ERVK-11Q9UQG0 969 aa11.89□□□□□ -0.51
SEMA6A-202ENST00000343348 C8GP07360 202 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 STOMP27105 288 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 DNAJA1P31689 397 aaKnown RBP11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 ERVK-21P61565 698 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 RHDQ02161 417 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 SH3D19Q5HYK7 790 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 INTS6LQ5JSJ4 861 aaKnown RBP11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 HSDL2Q6YN16 418 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 CCDC107Q8WV48 283 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 SMURF1Q9HCE7 757 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 RIPK3Q9Y572 518 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 SPATA31A6Q5VVP1 1343 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 ALPIP09923 528 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 ELNP15502 786 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 CDKN1CP49918 316 aaPredicted RBP11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 SCAMP5Q8TAC9 235 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 TLE6Q9H808 572 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 PREBQ9HCU5 417 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 TIGARQ9NQ88 270 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 CALML5Q9NZT1 146 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 RUVBL1Q9Y265 456 aaKnown RBP11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 ITGA10O75578 1167 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 HERVK_113P63132 956 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 CD47Q08722 323 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 XKRXQ6PP77 449 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 CMTR2Q8IYT2 770 aaKnown RBP11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 THAP6Q8TBB0 222 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 GPR20Q99678 358 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 ERVK-6Q9BXR3 956 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 ABCB8Q9NUT2 735 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 FBXW11Q9UKB1 542 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 HIF3AQ9Y2N7 669 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 DERAQ9Y315 318 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 CMAHPQ9Y471 501 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 LDB2O43679 373 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 FESP07332 822 aa11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 PTX3P26022 381 aaPredicted RBP11.88□□□□□ -0.51
SEMA6A-202ENST00000343348 UFM1P61960 85 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms