RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CHRNB1P11230 501 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 NAT1P18440 290 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 CCND3P30281 292 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 RCVRNP35243 200 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 STC1P52823 247 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SEC13P55735 322 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 PIGFQ07326 219 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 CES5AQ6NT32 575 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 PHC2Q8IXK0 858 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SCML4Q8N228 414 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 ZMIZ2Q8NF64 920 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 ABHD11Q8NFV4 315 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 DNASE1L2Q92874 299 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 POP5Q969H6 163 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 YIPF4Q9BSR8 244 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 RIOK2Q9BVS4 552 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 TMEM138Q9NPI0 162 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 MALT1Q9UDY8 824 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SCML2Q9UQR0 700 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 RUVBL1Q9Y265 456 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 OAS3Q9Y6K5 1087 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 URADA6NGE7 173 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 CLIC1O00299 241 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 KHDRBS3O75525 346 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 KLHL18O94889 574 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 PSMA1P25786 263 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 NUDT6P53370 316 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 RAB25P57735 213 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 RGS8P57771 180 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 CAP1Q01518 475 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 MEP1AQ16819 746 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 TBRG1Q3YBR2 411 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 ARSIQ5FYB1 569 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 ANKRD26P1Q6NSI1 321 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SMARCD3Q6STE5 483 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 USP43Q70EL4 1123 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 CXXC5Q7LFL8 322 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 ZZZ3Q8IYH5 903 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SH3RF2Q8TEC5 729 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 TVP23BQ9NYZ1 205 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 BAIAP2Q9UQB8 552 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 H0YJX3 145 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SCN2BO60939 215 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 NME6O75414 186 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SNX4O95219 450 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 IQCF3P0C7M6 154 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 RPL10P27635 214 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 RYKP34925 604 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SRSF11Q05519 484 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 GRB7Q14451 532 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 RFTN1Q14699 578 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 TOMM20Q15388 145 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 TAF13Q15543 124 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 NPTX1Q15818 432 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SPANXN4Q5MJ08 99 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SNAP47Q5SQN1 464 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 PIK3R6Q5UE93 754 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 FAM91A1Q658Y4 838 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 CADM2Q8N3J6 435 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SUV39H2Q9H5I1 410 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 PHPT1Q9NRX4 125 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 FZD4Q9ULV1 537 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 YIPF1Q9Y548 306 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 PCDHGA11Q9Y5H2 935 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 FAM240BA0A1B0GVZ2 78 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 PRNPP04156 253 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 HTR2BP41595 481 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SKP1P63208 163 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 GRB14Q14449 540 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 ZNF267Q14586 743 aaPredicted RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 PCBP2Q15366 365 aaKnown RBP eCLIP7.87□□□□□ -1.152e-8■■■■■ 29
UBE4B-202ENST00000343090 Q6ZVU0 165 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 ZNF280BQ86YH2 543 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SNX29P2Q8IUI4 249 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 C1orf52Q8N6N3 182 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 CHPT1Q8WUD6 406 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 ZNF599Q96NL3 588 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 TBC1D17Q9HA65 648 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 SMURF2Q9HAU4 748 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 UCKL1Q9NWZ5 548 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 MOCS1Q9NZB8 636 aa7.87□□□□□ -1.15
UBE4B-202ENST00000343090 CFAP20Q9Y6A4 193 aaKnown RBP7.87□□□□□ -1.15
UBE4B-202ENST00000343090 C10orf71Q711Q0 1435 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SDHDO14521 159 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 PGRMC2O15173 223 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 NUAK1O60285 661 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 MSL3P1P0C860 447 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 NT5EP21589 574 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 GCAP28676 217 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 BDKRB1P46663 353 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 CARD16Q5EG05 197 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 KREMEN2Q8NCW0 462 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 TRPV3Q8NET8 790 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 LMLNQ96KR4 655 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 MRGPRX2Q96LB1 330 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 MUS81Q96NY9 551 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SMG9Q9H0W8 520 aaKnown RBP7.86□□□□□ -1.15
UBE4B-202ENST00000343090 SNTG1Q9NSN8 517 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 POU2F3Q9UKI9 436 aa7.86□□□□□ -1.15
UBE4B-202ENST00000343090 MYH3P11055 1940 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms