RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 DPYSL5Q9BPU6 564 aa17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 ABCG4Q9H172 646 aa17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 ZBTB26Q9HCK0 441 aa17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 ABCF3Q9NUQ8 709 aa17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 STK38LQ9Y2H1 464 aa17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 RP1P56715 2156 aa17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 FAM186AA6NE01 2351 aa17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 RIF1Q5UIP0 2472 aaKnown RBP17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 ASXL3Q9C0F0 2248 aa17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 MN1Q10571 1320 aaPredicted RBP17.24■□□□□ 0.35
SDCBP2-201ENST00000339987 PCM1Q15154 2024 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 A0A1W2PQM1 296 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 TMEM114B3SHH9 223 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 KLF11O14901 512 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 CAPN5O15484 640 aaPredicted RBP17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 MLYCDO95822 493 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 C9P02748 559 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 RPLP0P05388 317 aaKnown RBP17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 GNAZP19086 355 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 CSRP1P21291 193 aaKnown RBP17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 HRH2P25021 359 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 CSF2RBP32927 897 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 CFHR1Q03591 330 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 LCP2Q13094 533 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 RCN2Q14257 317 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 NAA25Q14CX7 972 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 SF1Q15637 639 aaKnown RBP17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 ATG16L1Q676U5 607 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 ZCCHC23Q6ZST2 131 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 PLXDC1Q8IUK5 500 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 KIAA2013Q8IYS2 634 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 CARFQ8N187 725 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 WDR48Q8TAF3 677 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 CKAP2Q8WWK9 683 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 SLC5A11Q8WWX8 675 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 NCSTNQ92542 709 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 NEIL2Q969S2 332 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 MOCOSQ96EN8 888 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 ACAT2Q9BWD1 397 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 DRC3Q9H069 523 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 EHD1Q9H4M9 534 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 MANSC1Q9H8J5 431 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 IPPKQ9H8X2 491 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 ACSS2Q9NR19 701 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 PCDHGA1Q9Y5H4 931 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 KLK4Q9Y5K2 254 aa17.23■□□□□ 0.35
SDCBP2-201ENST00000339987 A0A0J9YY10 115 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 NTN3O00634 580 aaPredicted RBP17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 CLGNO14967 610 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 SNUPNO95149 360 aaKnown RBP17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 CPNE6O95741 557 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 PPM1FP49593 454 aaPredicted RBP17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 CDH13P55290 713 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 PPP1CAP62136 330 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 GALNT1Q10472 559 aaPredicted RBP17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 STX3Q13277 289 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 E2F2Q14209 437 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 CES4AQ5XG92 561 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 IRGCQ6NXR0 463 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 RPS27LQ71UM5 84 aaKnown RBP17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 ABHD11Q8NFV4 315 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 MAGEB18Q96M61 343 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 ZNF382Q96SR6 550 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 NTMT1Q9BV86 223 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 NOL11Q9H8H0 719 aaKnown RBP17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 PELI2Q9HAT8 420 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 MRPS30Q9NP92 439 aaKnown RBP17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 SEMA4BQ9NPR2 832 aaPredicted RBP17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 ANKMY1Q9P2S6 941 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 SH2B3Q9UQQ2 575 aa17.22■□□□□ 0.35
SDCBP2-201ENST00000339987 TLCD2A6NGC4 264 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 E7EQ34 232 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 OR7A17O14581 309 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 SLC30A4O14863 429 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 TM4SF5O14894 197 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 OTCP00480 354 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 CDH1P12830 882 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 MDH1P40925 334 aaKnown RBP17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 CASP2P42575 452 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 PKNOX1P55347 436 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 GFERP55789 205 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 E2F1Q01094 437 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 BST1Q10588 318 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 TRAF3Q13114 568 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 TRIP6Q15654 476 aaKnown RBP17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 TBCCQ15814 346 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 KIAA1614Q5VZ46 1190 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 ATG9BQ674R7 924 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 TMEM71Q6P5X7 295 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 NXPE4Q6UWF7 544 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 SLCO4C1Q6ZQN7 724 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 RGS9BPQ6ZS82 235 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 USP53Q70EK8 1073 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 DEFB124Q8NES8 71 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 TRPC4APQ8TEL6 797 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 ZNF75CPQ92670 426 aaPredicted RBP17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 WDR34Q96EX3 536 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 TGM7Q96PF1 710 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 SEMA6CQ9H3T2 930 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 SLC6A20Q9NP91 592 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms