RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 C1GALT1C1LP0DN25 315 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 PSMB5P28074 263 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 PKLRP30613 574 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 YBX1P67809 324 aaKnown RBP14.19□□□□□ -0.14
CBX3-201ENST00000337620 PCDH1Q08174 1060 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 SRSF5Q13243 272 aaKnown RBP14.19□□□□□ -0.14
CBX3-201ENST00000337620 NAA25Q14CX7 972 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 C6orf136Q5SQH8 315 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 IYDQ6PHW0 289 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 NXPE4Q6UWF7 544 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 TRIM46Q7Z4K8 759 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 WDR5BQ86VZ2 330 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 C17orf64Q86WR6 236 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 TRIM48Q8IWZ4 208 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 PATE1Q8WXA2 126 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 CMTM5Q96DZ9 223 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 C1orf50Q9BV19 199 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 LRRC61Q9BV99 259 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 RAB11FIP5Q9BXF6 653 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 KIR3DX1Q9H7L2 352 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 ICKQ9UPZ9 632 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 SDK1Q7Z5N4 2213 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 PCM1Q15154 2024 aa14.19□□□□□ -0.14
CBX3-201ENST00000337620 LSM1O15116 133 aaKnown RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 BCAT2O15382 392 aaPredicted RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 PRR35P0CG20 571 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 CDH1P12830 882 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 TDGF1P13385 188 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 CD1EP15812 388 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 CASP2P42575 452 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 DHPSP49366 369 aaPredicted RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 RASSF2P50749 326 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 NME5P56597 212 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 C21orf59P57076 290 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 STX1BP61266 288 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 MEF2AQ02078 507 aaPredicted RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 DDX39BQ13838 428 aaKnown RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 SQLEQ14534 574 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 RPS6KA2Q15349 733 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 AP5B1Q2VPB7 878 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 ATG9BQ674R7 924 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 SPATA19Q7Z5L4 167 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 LONP2Q86WA8 852 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 RNF175Q8N4F7 328 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 FAM46DQ8NEK8 389 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 OR4E2Q8NGC2 313 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 OR2L8Q8NGY9 312 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 LCN9Q8WX39 176 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 KLHL29Q96CT2 875 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 PCBD2Q9H0N5 130 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 RRP15Q9Y3B9 282 aaKnown RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 CCL27Q9Y4X3 112 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 THADAQ6YHU6 1953 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 ARHGEF17Q96PE2 2063 aaPredicted RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 A0A1W2PPV9 198 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 VIPP01282 170 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 PCNAP12004 261 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 COX4I1P13073 169 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 SLC2A4P14672 509 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 AFF3P51826 1226 aaKnown RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 DIO3P55073 304 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 NXPH1P58417 271 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 ERVK-8P63133 956 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 SLBPQ14493 270 aaKnown RBP eCLIP14.18□□□□□ -0.14
CBX3-201ENST00000337620 OGFOD2Q6N063 350 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 RNF165Q6ZSG1 346 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 SFTPA2Q8IWL1 248 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 MAML2Q8IZL2 1156 aaPredicted RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 SLC7A6OSQ96CW6 309 aaPredicted RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 PPP3R2Q96LZ3 170 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 MTERF1Q99551 399 aaKnown RBP14.18□□□□□ -0.14
CBX3-201ENST00000337620 EFCAB11Q9BUY7 163 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 ACPTQ9BZG2 426 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 MRGBPQ9NV56 204 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 PCDHGA11Q9Y5H2 935 aa14.18□□□□□ -0.14
CBX3-201ENST00000337620 NCOR1O75376 2440 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 H0YIV9 168 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 PSMD12O00232 456 aaPredicted RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 SLC22A2O15244 555 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 NME1P15531 152 aaKnown RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 ADSLP30566 484 aaPredicted RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 ACTN3Q08043 901 aaPredicted RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 PLCL1Q15111 1095 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 ELOCQ15369 112 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 HIST2H2ACQ16777 129 aaPredicted RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 RFTN2Q52LD8 501 aaPredicted RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 PAGE2BQ5JRK9 111 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 HIST2H2AA3Q6FI13 130 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 MED27Q6P2C8 311 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 AMIGO1Q86WK6 493 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 KIF2BQ8N4N8 673 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 TMEM105Q8N8V8 129 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 OR7G3Q8NG95 312 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 HMGCLL1Q8TB92 370 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 WDR20Q8TBZ3 569 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 LMX1AQ8TE12 382 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 GEMIN8Q9NWZ8 242 aaKnown RBP14.17□□□□□ -0.14
CBX3-201ENST00000337620 CCDC167Q9P0B6 97 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 SPAG17Q6Q759 2223 aa14.17□□□□□ -0.14
CBX3-201ENST00000337620 OR5K4A6NMS3 321 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms