RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 RPS3P23396 243 aaKnown RBP eCLIP11.97□□□□□ -0.494e-6■■■■□ 22.8
VPS33B-201ENST00000333371 CCR7P32248 378 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 OCA2Q04671 838 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 CDH18Q13634 790 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 LRIF1Q5T3J3 769 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 NEK5Q6P3R8 708 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 CCDC71Q8IV32 467 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-201ENST00000333371 HOMEZQ8IX15 550 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 CLECL1Q8IZS7 167 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 TMEM132CQ8N3T6 1108 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 OVCA2Q8WZ82 227 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 CEP295NLQ96MC4 621 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 ATG10Q9H0Y0 220 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 ELOVL6Q9H5J4 265 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 ATP13A3Q9H7F0 1226 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 SACM1LQ9NTJ5 587 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 THG1LQ9NWX6 298 aaKnown RBP11.97□□□□□ -0.49
VPS33B-201ENST00000333371 PDP1Q9P0J1 537 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-201ENST00000333371 M0R3G1 203 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 MTX2O75431 263 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 WDR47O94967 919 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 LCKP06239 509 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 HOXA9P31269 272 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 RYKP34925 604 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 CASP9P55211 416 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 CLDN8P56748 225 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 SLC35A2P78381 396 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 B4GALNT1Q00973 533 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 TLE2Q04725 743 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 VEPH1Q14D04 833 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 CDKN3Q16667 212 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 CATSPEREQ5SY80 951 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 SHQ1Q6PI26 577 aaKnown RBP11.97□□□□□ -0.49
VPS33B-201ENST00000333371 HIPK1Q86Z02 1210 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF540Q8NDQ6 660 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 ALG14Q96F25 216 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 BBS2Q9BXC9 721 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 PALMDQ9NP74 551 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 PAK6Q9NQU5 681 aaPredicted RBP11.97□□□□□ -0.49
VPS33B-201ENST00000333371 AASDHPPTQ9NRN7 309 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 CD84Q9UIB8 345 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 GMPPBQ9Y5P6 360 aa11.97□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF106Q9H2Y7 1883 aaKnown RBP11.97□□□□□ -0.49
VPS33B-201ENST00000333371 YY2O15391 372 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 RECQL5O94762 991 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 GABARAPO95166 117 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 CPSF4O95639 269 aaKnown RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 KRT6AP02538 564 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 KRT6BP04259 564 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 NUDT7P0C024 238 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 AQP1P29972 269 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 KRT6CP48668 564 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 BCL2L1Q07817 233 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 FOXD4Q12950 439 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 INAQ16352 499 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 PTCHD3Q3KNS1 767 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 TRIM60Q495X7 471 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 OR2T5Q6IEZ7 315 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 UBE2R2Q712K3 238 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 DSG4Q86SJ6 1040 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 NXPE1Q8N323 547 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 BEND7Q8N7W2 519 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 OR2T29Q8NH02 315 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 TMEM169Q96HH4 297 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 REXO5Q96IC2 774 aaKnown RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 CLSTN3Q9BQT9 956 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 HERC2P3Q9BVR0 1158 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 VN1R3Q9BXE9 311 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 REXO4Q9GZR2 422 aaKnown RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 MAGIXQ9H6Y5 334 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 AMBNQ9NP70 447 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 SLC22A14Q9Y267 594 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 PRRG1O14668 218 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 UGT2B4P06133 528 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 ANXA5P08758 320 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 CCDC159P0C7I6 412 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 CCL5P13501 91 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 ENGP17813 658 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 STK19P49842 368 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 TOP3AQ13472 1001 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 DDX39BQ13838 428 aaKnown RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF846Q147U1 533 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 CLCA4Q14CN2 919 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 OXA1LQ15070 435 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 ATP13A5Q4VNC0 1218 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 INO80DQ53TQ3 878 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 ADNP2Q6IQ32 1131 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 PDE12Q6L8Q7 609 aaKnown RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 SLC39A5Q6ZMH5 540 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF621Q6ZSS3 439 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 TTC29Q8NA56 475 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 OR52E4Q8NGH9 312 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF461Q8TAF7 563 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 FBLIM1Q8WUP2 373 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 FOXJ1Q92949 421 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 TPD52L3Q96J77 140 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 ZNF641Q96N77 438 aaPredicted RBP11.96□□□□□ -0.49
VPS33B-201ENST00000333371 BTBD2Q9BX70 525 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 SLC32A1Q9H598 525 aa11.96□□□□□ -0.49
VPS33B-201ENST00000333371 OGDHLQ9ULD0 1010 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms