RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 SELPLGQ14242 412 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 SF1Q15637 639 aaKnown RBP17.3■□□□□ 0.36
ACTB-201ENST00000331789 NOXRED1Q6NXP6 359 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 IZUMO2Q6UXV1 221 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 HORMAD1Q86X24 394 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 LILRA2Q8N149 483 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 SIPA1Q96FS4 1042 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 EGLN2Q96KS0 407 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 FBRSQ9HAH7 460 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 CD93Q9NPY3 652 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 TRPV5Q9NQA5 729 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 ITM2CQ9NQX7 267 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 SPATA6Q9NWH7 488 aaPredicted RBP17.3■□□□□ 0.36
ACTB-201ENST00000331789 C6orf203Q9P0P8 240 aaPredicted RBP17.3■□□□□ 0.36
ACTB-201ENST00000331789 USP22Q9UPT9 525 aa17.3■□□□□ 0.36
ACTB-201ENST00000331789 MAGEB17A8MXT2 336 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 LRATO95237 230 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 IL6P05231 212 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 MYCLP1P12525 358 aaPredicted RBP17.29■□□□□ 0.36
ACTB-201ENST00000331789 ACP5P13686 325 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 ACADSP16219 412 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 SOX11P35716 441 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 PPP2CBP62714 309 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 PPP2CAP67775 309 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 PHC1P78364 1004 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 OR7G3Q8NG95 312 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 GTF2H4Q92759 462 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 RAD51AP1Q96B01 352 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 SLCO4A1Q96BD0 722 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 LRGUKQ96M69 825 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 UHRF1Q96T88 793 aaPredicted RBP17.29■□□□□ 0.36
ACTB-201ENST00000331789 CGREF1Q99674 301 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 ZNF184Q99676 751 aaPredicted RBP17.29■□□□□ 0.36
ACTB-201ENST00000331789 PKP2Q99959 881 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 ECSITQ9BQ95 431 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 ALG2Q9H553 416 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 PIF1Q9H611 641 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 C8orf33Q9H7E9 229 aaPredicted RBP17.29■□□□□ 0.36
ACTB-201ENST00000331789 VPS29Q9UBQ0 182 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 TMED5Q9Y3A6 229 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 PLEKHM1Q9Y4G2 1056 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 PCDHGA11Q9Y5H2 935 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 SPTBN5Q9NRC6 3674 aaKnown RBP17.29■□□□□ 0.36
ACTB-201ENST00000331789 CASQ2O14958 399 aaPredicted RBP17.29■□□□□ 0.36
ACTB-201ENST00000331789 SLC31A1O15431 190 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 LATO43561 262 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 ETHE1O95571 254 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 PGRP06401 933 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 CEACAM5P06731 702 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 KELP23276 732 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 MAPK1P28482 360 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 CLCNKAP51800 687 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 EEFSECP57772 596 aaKnown RBP17.29■□□□□ 0.36
ACTB-201ENST00000331789 ZNF33BQ06732 778 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 E2F2Q14209 437 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 MAPKAPK3Q16644 382 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 SPPL2CQ8IUH8 684 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 GFM2Q969S9 779 aaKnown RBP17.29■□□□□ 0.36
ACTB-201ENST00000331789 ZUFSPQ96AP4 578 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 FCRL1Q96LA6 429 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 OR52E6Q96RD3 313 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 KCTD14Q9BQ13 255 aaPredicted RBP17.29■□□□□ 0.36
ACTB-201ENST00000331789 KLHL4Q9C0H6 718 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 PRM3Q9NNZ6 103 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 PPT2Q9UMR5 302 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 NEUROG3Q9Y4Z2 214 aa17.29■□□□□ 0.36
ACTB-201ENST00000331789 ZNF839A8K0R7 811 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 DFNA5O60443 496 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 KCNH1O95259 989 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 STAMBPO95630 424 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 ASGR2P07307 311 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 C1GALT1C1LP0DN25 315 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 GRIA3P42263 894 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 MTPNP58546 118 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 MRPS21P82921 87 aaKnown RBP17.28■□□□□ 0.36
ACTB-201ENST00000331789 MEF2AQ02078 507 aaPredicted RBP17.28■□□□□ 0.36
ACTB-201ENST00000331789 BNIP2Q12982 314 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 SPATS1Q496A3 300 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 SFT2D3Q587I9 215 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 CMPK2Q5EBM0 449 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 THEMIS2Q5TEJ8 643 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 DUS1LQ6P1R4 473 aaKnown RBP17.28■□□□□ 0.36
ACTB-201ENST00000331789 TMEM92Q6UXU6 159 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 DCUN1D3Q8IWE4 304 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 RPLP0P6Q8NHW5 317 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 HUS1BQ8NHY5 278 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 APOOQ9BUR5 198 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 CCDC177Q9NQR7 707 aaPredicted RBP17.28■□□□□ 0.36
ACTB-201ENST00000331789 GEMIN8Q9NWZ8 242 aaKnown RBP17.28■□□□□ 0.36
ACTB-201ENST00000331789 RIMS3Q9UJD0 308 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 MOSPD1Q9UJG1 213 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 WDR37Q9Y2I8 494 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 AP4S1Q9Y587 144 aa17.28■□□□□ 0.36
ACTB-201ENST00000331789 GPR89AB7ZAQ6 455 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 ARPC2O15144 300 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 NARSO43776 548 aaKnown RBP17.27■□□□□ 0.36
ACTB-201ENST00000331789 GPR89BP0CG08 455 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 SLBPQ14493 270 aaKnown RBP eCLIP17.27■□□□□ 0.36
ACTB-201ENST00000331789 ATG9BQ674R7 924 aa17.27■□□□□ 0.36
ACTB-201ENST00000331789 MED27Q6P2C8 311 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms