RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 PMS2P3Q13401 168 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 UGT8Q16880 541 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 ZNF284Q2VY69 593 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 POM121L1PQ3SYA9 428 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 ZNF805Q5CZA5 627 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 XKR6Q5GH73 641 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 DOK6Q6PKX4 331 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 PJA1Q8NG27 643 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 NELL1Q92832 810 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 GLMNQ92990 594 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 ISOC1Q96CN7 298 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 VPS35Q96QK1 796 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 MBOAT4Q96T53 435 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 THG1LQ9NWX6 298 aaKnown RBP14.12□□□□□ -0.15
TPM3-206ENST00000330188 IFT80Q9P2H3 777 aaPredicted RBP14.12□□□□□ -0.15
TPM3-206ENST00000330188 EBF1Q9UH73 591 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 GNGT2O14610 69 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 PRPS1L1P21108 318 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 XPAP23025 273 aaPredicted RBP14.12□□□□□ -0.15
TPM3-206ENST00000330188 ELK4P28324 431 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 WEE1P30291 646 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 MMP12P39900 470 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 PREPP48147 710 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 WNT3P56703 355 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 ZNF33BQ06732 778 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 DOC2AQ14183 400 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 DPY19L1Q2PZI1 675 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 CCSMST1Q4G0I0 132 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 SYTL3Q4VX76 610 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 PRSS36Q5K4E3 855 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 LDLRAP1Q5SW96 308 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 ANKRD34AQ69YU3 496 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 SYT12Q8IV01 421 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 KLHDC8AQ8IYD2 350 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 ZCCHC7Q8N3Z6 543 aaKnown RBP14.12□□□□□ -0.15
TPM3-206ENST00000330188 OR7A2PQ8NGA2 310 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 GLYATL1Q969I3 302 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 REXO4Q9GZR2 422 aaKnown RBP14.12□□□□□ -0.15
TPM3-206ENST00000330188 IL23AQ9NPF7 189 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 TIMMDC1Q9NPL8 285 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 SPATA6Q9NWH7 488 aaPredicted RBP14.12□□□□□ -0.15
TPM3-206ENST00000330188 STOX2Q9P2F5 926 aaPredicted RBP14.12□□□□□ -0.15
TPM3-206ENST00000330188 DKK3Q9UBP4 350 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 VPS29Q9UBQ0 182 aa14.12□□□□□ -0.15
TPM3-206ENST00000330188 SLC5A10A0PJK1 596 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 NOBOXO60393 691 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 SCN2BO60939 215 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 RECQL5O94762 991 aaPredicted RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 C1QCP02747 245 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 BDKRB1P46663 353 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 TRPC1P48995 793 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 PRLHRP49683 370 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 NAE1Q13564 534 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 CBX2Q14781 532 aaPredicted RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 MYBPC3Q14896 1274 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 DUOXA1Q1HG43 343 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 CES5AQ6NT32 575 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 AGTRAPQ6RW13 159 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 SPESP1Q6UW49 350 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 LIPIQ6XZB0 460 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 KCTD8Q6ZWB6 473 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 CHST15Q7LFX5 561 aaPredicted RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 TMEM179BQ7Z7N9 219 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 ADHFE1Q8IWW8 467 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 ZNF366Q8N895 744 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 OR5K1Q8NHB7 308 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 ATL1Q8WXF7 558 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 TMEM159Q96B96 161 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 OTUB2Q96DC9 234 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 PYURFQ96I23 114 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 CCDC138Q96M89 665 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 OR4K3Q96R72 315 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 MTERF1Q99551 399 aaKnown RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 RBM4BQ9BQ04 359 aaKnown RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 RBM4Q9BWF3 364 aaKnown RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 OCEL1Q9H607 264 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 FAM118AQ9NWS6 357 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 FBXO10Q9UK96 956 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 INSL6Q9Y581 213 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 ZNF701M0R085 212 aaPredicted RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 PRMT3O60678 531 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 ATG13O75143 517 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 SRSF11Q05519 484 aaKnown RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 EPS8Q12929 822 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 PPP1R8Q12972 351 aaKnown RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 RAB39AQ14964 217 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 TTC23Q5W5X9 447 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 GRHL2Q6ISB3 625 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 PARS2Q7L3T8 475 aaKnown RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 THAP5Q7Z6K1 395 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 SERPINA11Q86U17 422 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 PNPT1Q8TCS8 783 aaKnown RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 POP5Q969H6 163 aaKnown RBP14.11□□□□□ -0.15
TPM3-206ENST00000330188 MED8Q96G25 268 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 CCM2Q9BSQ5 444 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 AMBRA1Q9C0C7 1298 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 POLR1BQ9H9Y6 1135 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 CXorf21Q9HAI6 301 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 CIDEBQ9UHD4 219 aa14.11□□□□□ -0.15
TPM3-206ENST00000330188 CDC14AQ9UNH5 594 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms