RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 MYL12AP19105 171 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 HRH2P25021 359 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 RYKP34925 604 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 CLCN4P51793 760 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 RAB14P61106 215 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 SCN1BQ07699 218 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 PTPRCAPQ14761 206 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 CDO1Q16878 200 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF667Q5HYK9 610 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 SLC35F1Q5T1Q4 408 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 PRMT9Q6P2P2 845 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ERICH5Q6P6B1 374 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ZC3HC1Q86WB0 502 aaKnown RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 SULF1Q8IWU6 871 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 DNAJB14Q8TBM8 379 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 STYXQ8WUJ0 223 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 FBLIM1Q8WUP2 373 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 TMEM143Q96AN5 459 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 TMEM176AQ96HP8 235 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 MNTQ99583 582 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 FAM124BQ9H5Z6 455 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 NMUR1Q9HB89 426 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 GALNT9Q9HCQ5 603 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ASAH2Q9NR71 780 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 CUEDC1Q9NWM3 386 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 SCN3BQ9NY72 215 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 TRABD2BA6NFA1 517 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 ABCD4O14678 606 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 INPPL1O15357 1258 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 FAM20BO75063 409 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 PSIP1O75475 530 aaKnown RBP11.54□□□□□ -0.56
SHMT2-201ENST00000328923 ATP6AP2O75787 350 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 TSPAN12O95859 305 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 IFNA7P01567 189 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 CAPN3P20807 821 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SDC4P31431 198 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 RAB13P51153 203 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 RRAS2P62070 204 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-201ENST00000328923 MVKQ03426 396 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 LIPEQ05469 1076 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 TP53BP2Q13625 1128 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SEZ6Q53EL9 994 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 ANKRD39Q53RE8 183 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 KLHL17Q6TDP4 642 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 BEND4Q6ZU67 534 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SLC16A13Q7RTY0 426 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 MINDY1Q8N5J2 469 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 COLGALT1Q8NBJ5 622 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SLC37A3Q8NCC5 494 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 TUBGCP3Q96CW5 907 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 MRPL48Q96GC5 212 aaKnown RBP11.54□□□□□ -0.56
SHMT2-201ENST00000328923 GPR78Q96P69 363 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SORCS2Q96PQ0 1159 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 C1QTNF1Q9BXJ1 281 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 MRPL4Q9BYD3 311 aaKnown RBP11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SRRQ9GZT4 340 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 GBA2Q9HCG7 927 aaPredicted RBP11.54□□□□□ -0.56
SHMT2-201ENST00000328923 IL1RAPQ9NPH3 570 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 ABCG2Q9UNQ0 655 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 PCDHA9Q9Y5H5 950 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 A0A0J9YYE9 177 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 A0A1W2PPL8 197 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 PQLC2LA1A4F0 135 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 FAM74A7A6NL05 159 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 HRO43593 1189 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SERPINF2P08697 491 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 CYP4B1P13584 511 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 PTAFRP25105 342 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SSTR2P30874 369 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SOX6P35712 828 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 TSPAN7P41732 249 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 EFNA5P52803 228 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 C2orf80Q0P641 193 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 MADCAM1Q13477 382 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 GPR33Q49SQ1 333 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 FAM74A3Q4VXF1 159 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 OR6B2Q6IFH4 312 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SCYL2Q6P3W7 929 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SPESP1Q6UW49 350 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 AHSA2Q719I0 299 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 RRM2BQ7LG56 351 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 TMEM135Q86UB9 458 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 TMEM125Q96AQ2 219 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 LRRC58Q96CX6 371 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 NIFKQ9BYG3 293 aaKnown RBP11.54□□□□□ -0.56
SHMT2-201ENST00000328923 ACTR6Q9GZN1 396 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 SMURF1Q9HCE7 757 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 NSMCE4AQ9NXX6 385 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 TRPS1Q9UHF7 1281 aa11.54□□□□□ -0.56
SHMT2-201ENST00000328923 MFSD2BA6NFX1 497 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 TARM1B6A8C7 271 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 PCDH17O14917 1159 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 HPGDSO60760 199 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 RPLP0P05388 317 aaKnown RBP11.53□□□□□ -0.56
SHMT2-201ENST00000328923 HBQ1P09105 142 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 ADRA1BP35368 520 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 GTF2A2P52657 109 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 CAPZA1P52907 286 aa11.53□□□□□ -0.56
SHMT2-201ENST00000328923 LRRC74AQ0VAA2 488 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms