RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 FRMPD3Q5JV73 1810 aa13.65□□□□□ -0.22
ATP2C1-201ENST00000328560 A0A1W2PRU2 124 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 CFAP99D6REC4 459 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 SOCS5O75159 536 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 PRPS2P11908 318 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 SRCP12931 536 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 ABHD18Q0P651 414 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 CDK5R2Q13319 367 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 AQP6Q13520 282 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 XKR6Q5GH73 641 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 FRG2Q64ET8 278 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF296Q8WUU4 475 aaPredicted RBP13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 GLMNQ92990 594 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 UBE2FQ969M7 185 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 FRG2BQ96QU4 278 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 YME1L1Q96TA2 773 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 RDH14Q9HBH5 336 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 DNAJC11Q9NVH1 559 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 B4GALT6Q9UBX8 382 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 TMEFF2Q9UIK5 374 aaPredicted RBP13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 SAMHD1Q9Y3Z3 626 aaKnown RBP13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 GMPPBQ9Y5P6 360 aa13.65□□□□□ -0.23
ATP2C1-201ENST00000328560 AXIN1O15169 862 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 PRAMEF4O60810 478 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 NDUFS2O75306 463 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF821O75541 412 aaPredicted RBP13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 CLPXO76031 633 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 JUNBP17275 347 aaPredicted RBP13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 PERM1Q5SV97 790 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 PRAMEF9Q5VWM5 478 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 PDE12Q6L8Q7 609 aaKnown RBP13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 Q6ZVU0 165 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 CHST14Q8NCH0 376 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 GPR156Q8NFN8 814 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 RORBQ92753 470 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 SCRN2Q96FV2 425 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 RDH12Q96NR8 316 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 BRD9Q9H8M2 597 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 THG1LQ9NWX6 298 aaKnown RBP13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 TRBV5-3A0A0A0MS03 114 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 GREM1O60565 184 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 FADS2O95864 444 aaKnown RBP13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 EPHA2P29317 976 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 NRIP1P48552 1158 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 CPZQ66K79 652 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 OR2T5Q6IEZ7 315 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 SNX29P2Q8IUI4 249 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 CENPSQ8N2Z9 138 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 OR2T29Q8NH02 315 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 UBTD2Q8WUN7 234 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 NELL1Q92832 810 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 TRMT2BQ96GJ1 504 aaKnown RBP13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 REXO5Q96IC2 774 aaKnown RBP13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 COX4I2Q96KJ9 171 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 RUBCNLQ9H714 662 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 MYO7AQ13402 2215 aa13.64□□□□□ -0.23
ATP2C1-201ENST00000328560 EPN2O95208 641 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 AOAHP28039 575 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 PBLDP30039 288 aaPredicted RBP13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 WEE1P30291 646 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 RECQLP46063 649 aaPredicted RBP13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 OCA2Q04671 838 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF691Q5VV52 312 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 GTF2IRD2BQ6EKJ0 949 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 GAREM2Q75VX8 874 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 GTF2IRD2Q86UP8 949 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 PJA1Q8NG27 643 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 USE1Q9NZ43 259 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 STOML2Q9UJZ1 356 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 M0R3G1 203 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 CYP2A7P20853 494 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 MAPK1P28482 360 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 OPRL1P41146 370 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 EMX1Q04741 257 aaPredicted RBP13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 TUBA3CQ13748 450 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 NPTX1Q15818 432 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 MPPE1Q53F39 396 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 ADNP2Q6IQ32 1131 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF540Q8NDQ6 660 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 PIK3C3Q8NEB9 887 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 ABHD11Q8NFV4 315 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 SAMD4AQ9UPU9 718 aaKnown RBP13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF99A8MXY4 864 aaPredicted RBP13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 WNT9AO14904 365 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 GP2P55259 537 aaKnown RBP13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 PRMT2P55345 433 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 VLDLRP98155 873 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 NAE1Q13564 534 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 RAB33AQ14088 237 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 EGFLAMQ63HQ2 1017 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 Q6ZNB5 142 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 LRRC70Q7Z2Q7 622 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 BTLAQ7Z6A9 289 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 CALHM3Q86XJ0 350 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 SH3KBP1Q96B97 665 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 CMTM7Q96FZ5 175 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 SLC12A9Q9BXP2 914 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 ASPSCR1Q9BZE9 553 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 COQ6Q9Y2Z9 468 aa13.63□□□□□ -0.23
ATP2C1-201ENST00000328560 ZNF451Q9Y4E5 1061 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms